traceplots {bitrugs} | R Documentation |
Create MCMC trace plots for the transmission parameters
traceplots(mcmcoutput, tracecol="lightgrey", labels=c("p","z","beta","gamma", "gamma_G","genpar"), burn=1, filter=1)
mcmcoutput |
MCMC output from the |
tracecol |
Trace color. |
labels |
Character vector for parameter names. |
burn |
Burn-in length. This is not plotted. |
filter |
Retain every |
Red lines indicate the mean (solid) and 95% credible intervals (dashed) for each parameter.
data(mcmcoutput) traceplots(mcmcoutput)