Methods run, sorted chronologically

>> means before, << means after


Command line suite

(Hover the method name to see the test class name)

TimeDelta (ms)Suite
configuration
Test
configuration
Class
configuration
Groups
configuration
Method
configuration
Test
method
ThreadInstances
19/09/23 14:28:13 0     >>beforeTest   main@1357563986
19/09/23 14:28:13 2     >>beforeTest   main@1357563986
19/09/23 14:28:13 3     >>beforeTest   main@1357563986
19/09/23 14:28:13 4     >>beforeTest   main@1357563986
19/09/23 14:28:13 4     >>beforeTest   main@1357563986
19/09/23 14:28:13 5     >>beforeTest   main@1357563986
19/09/23 14:28:13 5     >>beforeTest   main@1357563986
19/09/23 14:28:13 6     >>beforeTest   main@1357563986
19/09/23 14:28:13 6     >>beforeTest   main@1357563986
19/09/23 14:28:13 6     >>beforeTest   main@1357563986
19/09/23 14:28:13 7     >>beforeTest   main@1357563986
19/09/23 14:28:13 7     >>beforeTest   main@1357563986
19/09/23 14:28:13 8     >>beforeTest   main@1357563986
19/09/23 14:28:13 8     >>beforeTest   main@1357563986
19/09/23 14:28:13 8     >>beforeTest   main@1357563986
19/09/23 14:28:13 9     >>beforeTest   main@1357563986
19/09/23 14:28:13 10     >>beforeTest   main@1357563986
19/09/23 14:28:13 10     >>beforeTest   main@1357563986
19/09/23 14:28:13 11     >>beforeTest   main@1357563986
19/09/23 14:28:13 11     >>beforeTest   main@1357563986
19/09/23 14:28:13 211     >>setUp   main@1357563986
19/09/23 14:28:13 217     >>setUp   main@1357563986
19/09/23 14:28:13 218     >>setUp   main@1357563986
19/09/23 14:28:13 218     >>setUp   main@1357563986
19/09/23 14:28:13 219     >>setUp   main@1357563986
19/09/23 14:28:13 219     >>setUp   main@1357563986
19/09/23 14:28:13 168      testBamParams main@1357563986
19/09/23 14:28:13 13      testBasic main@1357563986
19/09/23 14:28:13 0      testBeyondMultipleIndels main@1357563986
19/09/23 14:28:13 239      testBigDel main@1357563986
19/09/23 14:28:13 -9      testChr1 main@1357563986
19/09/23 14:28:13 -2      testChrX main@1357563986
19/09/23 14:28:13 220      testCollapseRegions main@1357563986
19/09/23 14:28:13 48      testCombineJunctions main@1357563986
19/09/23 14:28:13 2      testCompare main@1357563986
19/09/23 14:28:13 238      testConvertAndFilter main@1357563986
19/09/23 14:28:13 246      testDelete main@1357563986
19/09/23 14:28:13 3      testDeletion main@1357563986
19/09/23 14:28:13 246      testEndToEnd main@1357563986
19/09/23 14:28:13 4      testExactMatch main@1357563986
19/09/23 14:28:13 247      testExactMatch main@1357563986
19/09/23 14:28:13 4      testExtendContig main@1357563986
19/09/23 14:28:13 230      testGetLeadingClips main@1357563986
19/09/23 14:28:13 230      testGetLeadingClips_empty main@1357563986
19/09/23 14:28:13 230      testGetMappedReadPortion main@1357563986
19/09/23 14:28:13 51      testGetRegionJunctions main@1357563986
19/09/23 14:28:13 226      testGetRepeatPeriod_HpRun main@1357563986
19/09/23 14:28:13 227      testGetRepeatPeriod_NoRepeat main@1357563986
19/09/23 14:28:13 227      testGetRepeatPeriod_NoRepeat1 main@1357563986
19/09/23 14:28:13 227      testGetRepeatPeriod_Str1 main@1357563986
19/09/23 14:28:13 228      testGetRepeatPeriod_Str2 main@1357563986
19/09/23 14:28:13 228      testGetRepeatPeriod_Str3 main@1357563986
19/09/23 14:28:13 228      testGetRepeatUnit_Homopolymer main@1357563986
19/09/23 14:28:13 228      testGetRepeatUnit_NearHomopolymer1 main@1357563986
19/09/23 14:28:13 228      testGetRepeatUnit_NearHomopolymer2 main@1357563986
19/09/23 14:28:13 229      testGetRepeatUnit_NearHomopolymer3 main@1357563986
19/09/23 14:28:13 229      testGetRepeatUnit_NearStr1 main@1357563986
19/09/23 14:28:13 229      testGetRepeatUnit_SingleNt main@1357563986
19/09/23 14:28:13 229      testGetRepeatUnit_Str1 main@1357563986
19/09/23 14:28:13 229      testGetRepeatUnit_Str2 main@1357563986
19/09/23 14:28:13 230      testGetRepeatUnit_Str3 main@1357563986
19/09/23 14:28:13 231      testGetTrailingClips main@1357563986
19/09/23 14:28:13 231      testGetTrailingClips_empty main@1357563986
19/09/23 14:28:13 5      testHasNDM main@1357563986
19/09/23 14:28:13 -2      testHg19Decoy main@1357563986
19/09/23 14:28:13 -2      testHg19Gl main@1357563986
19/09/23 14:28:13 5      testInjectSplice main@1357563986
19/09/23 14:28:13 6      testInjectSplices main@1357563986
19/09/23 14:28:13 247      testInsert main@1357563986
19/09/23 14:28:13 247      testInsert2 main@1357563986
19/09/23 14:28:13 6      testInsertion main@1357563986
19/09/23 14:28:13 6      testInsertionAtStart main@1357563986
19/09/23 14:28:13 7      testInsertionPartialOverlapAtEnd main@1357563986
19/09/23 14:28:13 7      testInsertionPartialOverlapAtStart main@1357563986
19/09/23 14:28:13 14      testLeading main@1357563986
19/09/23 14:28:13 250      testLeadingInsert main@1357563986
19/09/23 14:28:13 54      testLoadJunctionsFromGtf main@1357563986
19/09/23 14:28:13 352      testMapAmbiguousMatch main@1357563986
19/09/23 14:28:13 353      testMapAmbiguousMatchWithMismatches main@1357563986
19/09/23 14:28:13 353      testMapExact main@1357563986
19/09/23 14:28:13 354      testMapFiveMismatches main@1357563986
19/09/23 14:28:13 354      testMapNoSeedMatch main@1357563986
19/09/23 14:28:13 355      testMapOneMismatch main@1357563986
19/09/23 14:28:13 355      testMapSixMismatches main@1357563986
19/09/23 14:28:13 356      testMapSixMismatchesIncreasedMismatchRate main@1357563986
19/09/23 14:28:13 212      testMapToMultipleContigsSynonymously main@1357563986
19/09/23 14:28:13 8      testMatchSubset main@1357563986
19/09/23 14:28:13 231      testMergeSequences main@1357563986
19/09/23 14:28:13 232      testMergeSequences_discordantMismatch main@1357563986
19/09/23 14:28:13 232      testMergeSequences_multipleHeadHits main@1357563986
19/09/23 14:28:13 233      testMergeSequences_preferredMismatch main@1357563986
19/09/23 14:28:13 233      testMergeSequences_tooManyMismatches main@1357563986
19/09/23 14:28:13 251      testMismatches main@1357563986
19/09/23 14:28:13 217      testMultimapWithinContig main@1357563986
19/09/23 14:28:13 8      testMultipleIndels main@1357563986
19/09/23 14:28:13 206      testNoParams main@1357563986
19/09/23 14:28:13 14      testNone main@1357563986
19/09/23 14:28:13 11      testOverlaps main@1357563986
19/09/23 14:28:13 220      testPairJunctions main@1357563986
19/09/23 14:28:13 226      testPairJunctions_cannotAppearInSameContig main@1357563986
19/09/23 14:28:13 -2      testRandom main@1357563986
19/09/23 14:28:13 9      testReadBeyondDeletion main@1357563986
19/09/23 14:28:13 10      testReadBeyondInsertion main@1357563986
19/09/23 14:28:13 58      testReadTwoBams main@1357563986
19/09/23 14:28:13 233      testRemoveSoftClips_withDeletionAndSoftClipAtEnd main@1357563986
19/09/23 14:28:13 233      testRemoveSoftClips_withDeletionAndSoftClipAtStart main@1357563986
19/09/23 14:28:13 356      testReverseComplement2Mismatches main@1357563986
19/09/23 14:28:13 357      testReverseComplementExact main@1357563986
19/09/23 14:28:13 218      testSelectBestAlignment main@1357563986
19/09/23 14:28:13 14      testShiftCigarLeft_basic main@1357563986
19/09/23 14:28:13 17      testShiftCigarLeft_complex main@1357563986
19/09/23 14:28:13 17      testShiftCigarLeft_insertAtTail main@1357563986
19/09/23 14:28:13 18      testShiftCigarLeft_multipleIndels main@1357563986
19/09/23 14:28:13 18      testShiftCigarLeft_softClipping main@1357563986
19/09/23 14:28:13 18      testShiftDelLeft main@1357563986
19/09/23 14:28:13 20      testShiftIndelsLeft main@1357563986
19/09/23 14:28:13 47      testShiftIndelsLeft_LocalRef main@1357563986
19/09/23 14:28:13 357      testShortAmbiguousMatch main@1357563986
19/09/23 14:28:13 357      testSimple1Mismatch main@1357563986
19/09/23 14:28:13 218      testSingleAlignmentSingleContig main@1357563986
19/09/23 14:28:13 219      testSingleAlignmentSingleContig_noImprovement main@1357563986
19/09/23 14:28:13 219      testSingleAlignmentSingleContig_reverseComplement main@1357563986
19/09/23 14:28:13 10      testSkipDeletionAtEnd main@1357563986
19/09/23 14:28:13 10      testSkipDeletionAtStart main@1357563986
19/09/23 14:28:13 11      testSkipDeletionWithinStart main@1357563986
19/09/23 14:28:13 11      testSkipInsertionAtEnd main@1357563986
19/09/23 14:28:13 233      testSubsetCigar_deletion main@1357563986
19/09/23 14:28:13 234      testSubsetCigar_exact main@1357563986
19/09/23 14:28:13 234      testSubsetCigar_lessThan1Elem main@1357563986
19/09/23 14:28:13 234      testSubsetCigar_lessThan1Elem2 main@1357563986
19/09/23 14:28:13 234      testSubsetCigar_lessThan1Elem3 main@1357563986
19/09/23 14:28:13 235      testSubsetCigar_lessThanFirstElem main@1357563986
19/09/23 14:28:13 235      testSubsetCigar_long main@1357563986
19/09/23 14:28:13 235      testSubsetCigar_skipAndSpan1 main@1357563986
19/09/23 14:28:13 236      testSubsetCigar_skipAndSpan2 main@1357563986
19/09/23 14:28:13 236      testSubsetCigar_skipElem main@1357563986
19/09/23 14:28:13 236      testSubsetCigar_skipElem2 main@1357563986
19/09/23 14:28:13 236      testSubsetCigar_spanAll1 main@1357563986
19/09/23 14:28:13 236      testSubsetCigar_spanAll2 main@1357563986
19/09/23 14:28:13 237      testSubsetCigar_spanAll3 main@1357563986
19/09/23 14:28:13 237      testSubsetCigar_spanAll4 main@1357563986
19/09/23 14:28:13 237      testSubsetCigar_spanElems1 main@1357563986
19/09/23 14:28:13 237      testSubsetCigar_spanElems2 main@1357563986
19/09/23 14:28:13 237      testSubsetCigar_spanElems3 main@1357563986
19/09/23 14:28:13 14      testTrailing main@1357563986
19/09/23 14:28:13 251      testTrailingInsert main@1357563986
19/09/23 14:28:13 252      testUnderflowBug main@1357563986
19/09/23 14:28:13 -1      testUnplaced main@1357563986