R: createReport

createReport {WebGestaltR} | R Documentation

## createReport

### Description

Generate HTML report for ORA and GSEA

### Usage

    createReport(
      hostName,
      outputDirectory,
      organism = "hsapiens",
      projectName,
      enrichMethod,
      geneSet,
      geneSetDes,
      geneSetDag,
      geneSetNet,
      interestingGeneMap,
      referenceGeneList,
      enrichedSig,
      geneTables,
      clusters,
      background,
      enrichDatabase = NULL,
      enrichDatabaseFile = NULL,
      enrichDatabaseType = NULL,
      enrichDatabaseDescriptionFile = NULL,
      interestGeneFile = NULL,
      interestGene = NULL,
      interestGeneType = NULL,
      collapseMethod = "mean",
      referenceGeneFile = NULL,
      referenceGene = NULL,
      referenceGeneType = NULL,
      referenceSet = NULL,
      minNum = 10,
      maxNum = 500,
      fdrMethod = "BH",
      sigMethod = "fdr",
      fdrThr = 0.05,
      topThr = 10,
      reportNum = 20,
      perNum = 1000,
      p = 1,
      dagColor = "binary"
    )

[Package WebGestaltR version 0.4.4 Index]