R: Generate a neighbour joining tree

NJTree {TreeTools} | R Documentation

## Generate a neighbour joining tree

### Description

`NJTree()` generates a rooted neighbour joining tree from a phylogenetic dataset.

### Usage

    NJTree(dataset, edgeLengths = FALSE)

### Arguments

`dataset` | A phylogenetic data matrix of class `phyDat`, whose names correspond to the labels of any accompanying tree.
`edgeLengths` | Logical specifying whether to include edge lengths.

### Value

`NJTree` returns an object of class `phylo`.

### Author(s)

Martin R. Smith (martin.smith@durham.ac.uk)

### See Also

Other tree generation functions: `GenerateTree`, `SingleTaxonTree()`, `TreeNumber`

### Examples

    data('Lobo')
    NJTree(Lobo.phy)

[Package TreeTools version 1.2.0 Index]