R: Read a .trmn tree

readTrmn {treeman} | R Documentation

## Read a .trmn tree

### Description

Return a `TreeMan` or `TreeMen` object from a .trmn treefile

### Usage

    readTrmn(file, wndmtrx = FALSE, parallel = FALSE, progress = "none")

### Arguments

`file` | file path
`wndmtrx` | T/F add node matrix? Default FALSE.
`parallel` | logical, make parallel?
`progress` | name of the progress bar to use, see `create_progress_bar`

### Details

Read a tree(s) from a file using the .trmn format. It is faster to read and write tree files using treeman with the .trmn file format. In addition it is possible to encode more information than possible with the Newick, e.g. any taxonomic information and additional slot names added to the tree are recorded in the file.

### See Also

`writeTrmn`, `readTree`,`writeTree`, `randTree`, `saveTreeMan`, `loadTreeMan`

### Examples

    library(treeman)
    tree <- randTree(10)
    writeTrmn(tree, file='test.trmn')
    tree <- readTrmn('test.trmn')
    file.remove('test.trmn')

[Package treeman version 1.1.4 Index]