allEqual	allEqual
angleBetweenVectors	vector
asMriImage	asMriImage
copyImageFiles	files
createContactSheetGraphic	visualisation
createNeighbourhoodInfo	neighbourhoodInfo
createProjectionGraphic	visualisation
createSliceGraphic	visualisation
deduplicate	deduplicate
defaultInfoPanel	viewer
deserialiseReferenceObject	serialisation
DicomMetadata	DicomMetadata-class
DicomMetadata-class	DicomMetadata-class
emptyMatrix	emptyMatrix
ensureFileSuffix	paths
equivalent	equivalent
execute	execute
expandFileName	paths
extractDataFromMriImage	tractor.base-deprecated
extractMriImage	asMriImage
fi	lambda
fx	lambda
fxy	lambda
fxyz	lambda
getColourScale	colourScales
identifyImageFileNames	files
imageFileExists	files
implode	implode
indexList	indexList
is.emptyMatrix	emptyMatrix
is.nilObject	nilObject
isDeserialisable	serialisation
locateExecutable	execute
matchPaths	paths
mergeMriImages	mergeMriImages
MriImage	MriImage-class
MriImage-class	MriImage-class
neighbourhoodInfo	neighbourhoodInfo
newDicomMetadataFromFile	tractor.base-deprecated
newMriImageByExtraction	tractor.base-deprecated
newMriImageByMasking	tractor.base-deprecated
newMriImageByReordering	tractor.base-deprecated
newMriImageByThresholding	tractor.base-deprecated
newMriImageByTrimming	tractor.base-deprecated
newMriImageFromDicomDirectory	tractor.base-deprecated
newMriImageFromFile	tractor.base-deprecated
newMriImageWithBinaryFunction	tractor.base-deprecated
newMriImageWithData	tractor.base-deprecated
newMriImageWithSimpleFunction	tractor.base-deprecated
newSparseArrayWithData	newSparseArrayWithData
nilObject	nilObject
paths	paths
pluralise	pluralise
polarPlotPanel	viewer
printLabelledValues	printLabelledValues
promote	promote
readDicomDirectory	readDicomDirectory
readDicomFile	readDicomFile
readImageFile	files
registerDeserialiser	serialisation
registerPathHandler	files
relativePath	paths
removeImageFiles	files
removeImageFilesWithName	tractor.base-deprecated
reorderMriImage	asMriImage
resolveVector	vector
SerialisableObject	SerialisableObject-class
SerialisableObject-class	SerialisableObject-class
serialisation	serialisation
serialiseReferenceObject	serialisation
sortDicomDirectories	sortDicomDirectories
SparseArray	SparseArray-class
SparseArray-class	SparseArray-class
symlinkImageFiles	files
threadSafeTempFile	threadSafeTempFile
timeSeriesPanel	viewer
trimMriImage	asMriImage
vectorCrossProduct	vector
vectorLength	vector
viewImages	viewer
visualisation	visualisation
writeImageFile	files
writeMriImageToFile	tractor.base-deprecated
[,MriImage,ANY,ANY-method	index
[,MriImage,ANY,missing-method	index
[,MriImage,missing,ANY-method	index
[,MriImage,missing,missing-method	index
[,MriImage,MriImage,missing-method	index
[,SparseArray,ANY,ANY-method	index
[<-,MriImage,ANY,ANY-method	index
[<-,MriImage,ANY,missing-method	index
[<-,MriImage,missing,ANY-method	index
[<-,MriImage,missing,missing-method	index
[<-,MriImage,MriImage,missing-method	index
[<-,SparseArray,ANY,ANY-method	index
