R: Index Fungorum

fungorum {taxize} | R Documentation

## Index Fungorum

### Description

Search for taxonomic names in Index Fungorum

### Usage

    fg_name_search(q, anywhere = TRUE, limit = 10, ...)

    fg_author_search(q, anywhere = TRUE, limit = 10, ...)

    fg_epithet_search(q, anywhere = TRUE, limit = 10, ...)

    fg_name_by_key(key, ...)

    fg_name_full_by_lsid(lsid, ...)

    fg_all_updated_names(date, ...)

    fg_deprecated_names(date, ...)

### Arguments

`q` | (character) Query term
`anywhere` | (logical) Default: `TRUE`
`limit` | (integer) Number of results to return. max limit value appears to be 6000, not positive about that though
`...` | Curl options passed on to `GET`
`key` | (character) A IndexFungorum taxon key
`lsid` | (character) an LSID, e.,g. "urn:lsid:indexfungorum.org:names:81085"
`date` | (character) Date, of the form YYYMMDD

### Value

A `data.frame`, or `NULL` if no results

### References

http://www.indexfungorum.org/, API docs: http://www.indexfungorum.org/ixfwebservice/fungus.asmx

### Examples

    ## Not run:
    # NameSearch
    fg_name_search(q = "Gymnopus", limit = 2)
    fg_name_search(q = "Gymnopus")

    # EpithetSearch
    fg_epithet_search(q = "phalloides")

    # NameByKey
    fg_name_by_key(17703)

    # NameFullByKey
    fg_name_full_by_lsid("urn:lsid:indexfungorum.org:names:81085")

    # AllUpdatedNames
    fg_all_updated_names(date = gsub("-", "", Sys.Date() - 2))

    # DeprecatedNames
    fg_deprecated_names(date=20151001)

    # AuthorSearch
    fg_author_search(q = "Fayod", limit = 2)

    ## End(Not run)

[Package taxize version 0.9.0 Index]