R: plot a Spatial Line Segment Pattern

plot.psp {spatstat}

R Documentation

plot a Spatial Line Segment Pattern

Description

Plot a two-dimensional line segment pattern

Usage

  ## S3 method for class 'psp'
plot(x, ..., main, add=FALSE,
                     show.all=!add, show.window=show.all,
                     which.marks=1,
                     style=c("colour", "width", "none"),
                     ribbon=show.all,
                     ribsep=0.15, ribwid=0.05, ribn=1024,
                     do.plot=TRUE)

Arguments

`x`	The line segment pattern to be plotted. An object of class `"psp"`, or data which can be converted into this format by `as.psp()`.
`...`	extra arguments that will be passed to the plotting functions `segments` (to plot the segments) and `plot.owin` (to plot the observation window).
`main`	Character string giving a title for the plot.
`add`	Logical. If `TRUE`, the current plot is not erased; the segments are plotted on top of the current plot, and the window is not plotted (by default).
`show.all`	Logical value specifying whether to plot everything including the window, main title, and colour ribbon.
`show.window`	Logical value specifying whether to plot the window.
`which.marks`	Index determining which column of marks to use, if the marks of `x` are a data frame. A character string or an integer. Defaults to `1` indicating the first column of marks.
`style`	Character string specifying how to represent the mark value of each segment. If `style="colour"` (the default) segments are coloured according to their mark value. If `style="width"`, segments are drawn with a width proportional to their mark value. If `style="none"` the mark values are ignored.
`ribbon`	Logical flag indicating whether to display a ribbon showing the colour map (in which mark values are associated with colours).
`ribsep`	Factor controlling the space between the ribbon and the image.
`ribwid`	Factor controlling the width of the ribbon.
`ribn`	Number of different values to display in the ribbon.
`do.plot`	Logical value indicating whether to actually perform the plot.

Details

This is the plot method for line segment pattern datasets (of class "psp", see psp.object). It plots both the observation window Window(x) and the line segments themselves.

Plotting of the window Window(x) is performed by plot.owin. This plot may be modified through the ... arguments.

Plotting of the segments themselves is performed by the standard R function segments. Its plotting behaviour may also be modified through the ... arguments.

For a marked line segment pattern (i.e. if marks(x) is not NULL) the line segments are plotted in colours determined by the mark values. If marks(x) is a data frame, the default is to use the first column of marks(x) to determine the colours. To specify another column, use the argument which.marks. The colour map (associating mark values with colours) will be displayed as a vertical colour ribbon to the right of the plot, if ribbon=TRUE.

Value

(Invisibly) a colour map object specifying the association between marks and colours, if any. The return value also has an attribute "bbox" giving a bounding box for the plot.

Author(s)

Adrian Baddeley Adrian.Baddeley@curtin.edu.au and Rolf Turner r.turner@auckland.ac.nz

Examples

  X <- psp(runif(20), runif(20), runif(20), runif(20), window=owin())
  plot(X)
  plot(X, lwd=3)
  lettuce <- sample(letters[1:4], 20, replace=TRUE)
  marks(X) <- data.frame(A=1:20, B=factor(lettuce))
  plot(X)
  plot(X, which.marks="B")
  plot(X, style="width", col="grey")

[Package spatstat version 1.56-0 Index]