R: Create a group of locus objects from some SNPs, assign to...

make.geno {SNPassoc} | R Documentation

## Create a group of locus objects from some SNPs, assign to 'model.matrix' class.

### Description

This function prepares the CRITICAL element corresponding to matrix of genotypes necessary to be included in 'haplo.glm' function.

### Usage

    make.geno(data, SNPs.sel)

### Arguments

`data` | an object of class 'setupSNP' containing the the SNPs that will be used to estimate the haplotypes.
`SNPs.sel` | a vector indicating the names of SNPs that are used to estimate the haplotypes

### Value

the same as 'setupGeno' function, from 'haplo.stats' library, returns

### See Also

`snp`

### Examples

    ## Not run:
    data(SNPs)
    # first, we create an object of class 'setupSNP'
    datSNP<-setupSNP(SNPs,6:40,sep="")
    geno<-make.geno(datSNP,c("snp10001","snp10002","snp10003"))
    ## End(Not run)

[Package SNPassoc version 1.9-2 Index]