R: SNPs in a case-control study

SNPs {SNPassoc} | R Documentation

## SNPs in a case-control study

### Description

SNPs data.frame contains selected SNPs and other clinical covariates for cases and controls in a case-control study

SNPs.info.pos data.frame contains the names of the SNPs included in the data set 'SNPs' including their chromosome and their genomic position

### Usage

    data(SNPs)

### Format

'SNPs' data.frame contains the following columns:

id | identifier of each subject
casco | case or control status: 0-control, 1-case
sex | gender: Male and Female
blood.pre | arterial blood presure
protein | protein levels
snp10001 | SNP 1
snp10002 | SNP 2
... | ...
snp100036 | SNP 36

'SNPs.info.pos' data.frame contains the following columns: A data frame with 35 observations on the following 3 variables.

`snp`

  name of SNP

`chr`

  name of chromosome

`pos`

  genomic position

### Source

Data obtained from our department. The reference and details will be supplied after being published.

[Package SNPassoc version 1.9-2 Index]