Overlay {SeuratObject}R Documentation

Overlay Spatial Objects Over One Another

Description

Create an overlay of some query spatial object (x) against some target object (y). Basically, find all components of a query that fall within the bounds of a target spatial region

Usage

Overlay(x, y, invert = FALSE, ...)

## S4 method for signature 'Centroids,SpatialPolygons'
Overlay(x, y, invert = FALSE, ...)

## S4 method for signature 'Segmentation,SpatialPolygons'
Overlay(x, y, invert = FALSE, ...)

## S4 method for signature 'Molecules,SpatialPolygons'
Overlay(x, y, invert = FALSE, ...)

## S4 method for signature 'FOV,Spatial'
Overlay(x, y, invert = FALSE, ...)

## S4 method for signature 'FOV,SpatialPolygons'
Overlay(x, y, invert = FALSE, ...)

## S4 method for signature 'FOV,FOV'
Overlay(x, y, invert = FALSE, ...)

Arguments

x

Query Spatial object

y

Target Spatial object

invert

Invert the overlay and return only the components of x that fall outside the bounds of y

...

Ignored

Value

x with only the components that fall within the bounds of y

[Package SeuratObject version 4.1.0 Index]