Package: SeuratObject
Type: Package
Title: Data Structures for Single Cell Data
Version: 4.1.0
Date: 2022-04-29
Authors@R: c(
  person(given = 'Rahul', family = 'Satija', email = 'rsatija@nygenome.org', role = 'aut', comment = c(ORCID = '0000-0001-9448-8833')),
  person(given = 'Andrew', family = 'Butler', email = 'abutler@nygenome.org', role = 'aut', comment = c(ORCID = '0000-0003-3608-0463')),
  person(given = 'Paul', family = 'Hoffman', email = 'seurat@nygenome.org', role = c('aut', 'cre'), comment = c(ORCID = '0000-0002-7693-8957')),
  person(given = 'Tim', family = 'Stuart', email = 'tstuart@nygenome.org', role = 'aut', comment = c(ORCID = '0000-0002-3044-0897')),
  person(given = 'Jeff', family = 'Farrell', email = 'jfarrell@g.harvard.edu', role = 'ctb'),
  person(given = 'Shiwei', family = 'Zheng', email = 'szheng@nygenome.org', role = 'ctb', comment = c(ORCID = '0000-0001-6682-6743')),
  person(given = 'Christoph', family = 'Hafemeister', email = 'chafemeister@nygenome.org', role = 'ctb', comment = c(ORCID = '0000-0001-6365-8254')),
  person(given = 'Patrick', family = 'Roelli', email = 'proelli@nygenome.org', role = 'ctb'),
  person(given = "Yuhan", family = "Hao", email = 'yhao@nygenome.org', role = 'ctb', comment = c(ORCID = '0000-0002-1810-0822'))
  )
Description: Defines S4 classes for single-cell genomic data and associated
  information, such as dimensionality reduction embeddings, nearest-neighbor
  graphs, and spatially-resolved coordinates. Provides data access methods and
  R-native hooks to ensure the Seurat object is familiar to other R users. See
  Satija R, Farrell J, Gennert D, et al (2015) <doi:10.1038/nbt.3192>,
  Macosko E, Basu A, Satija R, et al (2015) <doi:10.1016/j.cell.2015.05.002>,
  and Stuart T, Butler A, et al (2019) <doi:10.1016/j.cell.2019.05.031> for
  more details.
URL: https://mojaveazure.github.io/seurat-object/,
        https://github.com/mojaveazure/seurat-object
BugReports: https://github.com/mojaveazure/seurat-object/issues
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.1.2
Depends: R (>= 4.0.0)
Imports: future, future.apply, grDevices, grid, Matrix (>= 1.3.3),
        methods, progressr, Rcpp (>= 1.0.5), sp, rgeos, rlang (>=
        0.4.7), stats, tools, utils
Suggests: ggplot2, testthat
Collate: 'RcppExports.R' 'zzz.R' 'generics.R' 'graph.R' 'assay.R'
        'centroids.R' 'command.R' 'data.R' 'default.R' 'jackstraw.R'
        'dimreduc.R' 'segmentation.R' 'keymixin.R' 'molecules.R'
        'spatial.R' 'fov.R' 'logmap.R' 'neighbor.R' 'seurat.R'
        'utils.R'
LinkingTo: Rcpp, RcppEigen
NeedsCompilation: yes
Packaged: 2022-04-30 16:40:40 UTC; paul
Author: Rahul Satija [aut] (<https://orcid.org/0000-0001-9448-8833>),
  Andrew Butler [aut] (<https://orcid.org/0000-0003-3608-0463>),
  Paul Hoffman [aut, cre] (<https://orcid.org/0000-0002-7693-8957>),
  Tim Stuart [aut] (<https://orcid.org/0000-0002-3044-0897>),
  Jeff Farrell [ctb],
  Shiwei Zheng [ctb] (<https://orcid.org/0000-0001-6682-6743>),
  Christoph Hafemeister [ctb] (<https://orcid.org/0000-0001-6365-8254>),
  Patrick Roelli [ctb],
  Yuhan Hao [ctb] (<https://orcid.org/0000-0002-1810-0822>)
Maintainer: Paul Hoffman <seurat@nygenome.org>
Repository: CRAN
Date/Publication: 2022-05-01 14:40:07 UTC
Built: R 4.0.5; x86_64-w64-mingw32; 2022-05-02 07:27:09 UTC; windows
Archs: x64
