a6361d6bce1120c228079a8f45e16cce *CITATION
ac1bef26b94bb3b15fc5c4b36c31153f *DESCRIPTION
a278e4ddf7e18bdb686d29deeaddb9cc *INDEX
50c28547d51e8cbb9a908e6696fedb86 *LICENSE
1d742753669bc5c7793429073b025ea3 *Meta/Rd.rds
f8ea4df26c13ed8c5e29869cbf2bb559 *Meta/demo.rds
429724b30f0322e2d56778dd130867d3 *Meta/features.rds
04b976bf04aa6f36b48607f0a45c98c1 *Meta/hsearch.rds
ff6e1137e22f50ce34eda828a6bcf622 *Meta/links.rds
430f060b12cf53582461f5d868dd3382 *Meta/nsInfo.rds
d146b6a4e43d23e2f313cb5a13cb4572 *Meta/package.rds
f47f171258d37858064cb460710ce893 *NAMESPACE
ebf0fc819595d631b8bf280c4b049940 *R/seqminer
c0c64a6b98a5a40c5369d9c3421ba748 *R/seqminer.rdb
2c0175833f0f75b13ae92c5f6cb6fe5d *R/seqminer.rdx
0fc479584e48a4ae306ba1121fa429ed *bgen/all.anno.filtered.extract.bgen
be4d632ee62142e3fceacf0a5c5e7f2d *bgen/all.anno.filtered.extract.bgen.bgi
34ab676ae0614287c6170163dbcc0c44 *demo/annotate.R
80afcb0fa924316b839b3d56655d05fe *demo/meta.workflow.R
076b6535f57410f9475402c8748869cf *demo/vcf.workflow.R
5f38e80a6309fae69143960ecaf58cd4 *doc/Manual.html
ec2fbf6fdc4886a052f398364d1ff41d *help/AnIndex
a4a4b33802509f86ee9b5572388d7212 *help/aliases.rds
196d0e32996337492cbd8a2c458b262e *help/paths.rds
20265e1afe3aad1a47f51b4faa4a6ec1 *help/seqminer.rdb
a23aad1f1fb59dd307fe23b9fcc41cd5 *help/seqminer.rdx
f840c8e38c524facd2721185a6c01ba5 *html/00Index.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
99459594463e253250c0ea1ca3dc30d8 *html/SeqMiner.html
237794d64852a3b69bd09afb33df466b *html/addJob.html
02b682e994fb2c493b860e0c784e8032 *html/annotateGene.html
544d210c27805384e8d50a7bd2338d0c *html/annotatePlain.html
0917b8f53ded35f04e5d944741ee8b34 *html/annotateVcf.html
b4e33c497c4db9f643aaa018de9d1d67 *html/createSingleChromosomeBCFIndex.html
50d4b8c74cdb01cfc01f577fc29f8f5d *html/createSingleChromosomeVCFIndex.html
36295ac16bd89c2fce39a2f9dd312bee *html/download.annotation.resource.html
40b026a4c40c1ce7b20cf800749a40a7 *html/getCovPair.html
4929d31a9211dd01c56b23a68b2d0ecc *html/getRefBase.html
4002fdec3f861d15344d93902b8cea15 *html/hasIndex.html
220b59db54f6bc29a2bcdb1ae53c510a *html/isDirWritable.html
7b7459b866da3eb795bc8062031b0a69 *html/isInRange.html
08c2536ad59d4d205d013f7480e1fbe8 *html/isTabixRange.html
f0f46d5f4f5edccf0e12a067ff168fb0 *html/isURL.html
5894a84cfdd63528191ec2cc553490a7 *html/makeAnnotationParameter.html
6323b4b8eea6f06b3dba295a4b6291a4 *html/newJob.html
ea1b8c8179177c0f2624405bee62c9a0 *html/newWorkflow.html
49ed37887b2420aecf794605dbfe8233 *html/openPlink.html
f14b10fccd29fb0e8ae823edbfde32c4 *html/readBGENToListByGene.html
93bb2187c791b8a38710cb819495b8f1 *html/readBGENToListByRange.html
ff2eca04ed6d58d82b1bba1a0c1ef3ca *html/readBGENToMatrixByGene.html
05725aca7faeaeafce099d21a0d9b8f6 *html/readBGENToMatrixByRange.html
8afaf9a7503472f3e23dd7bc3f778223 *html/readPlinkToMatrixByIndex.html
e7dc7541204f9b3ace2410e006209f11 *html/readSingleChromosomeBCFToMatrixByRange.html
9649b399713f83008162ddbb6ccae2db *html/readSingleChromosomeVCFToMatrixByRange.html
b257d3f4a645b32c1263a02dfb2183f6 *html/readVCFToListByGene.html
97c26618524810f01f5e310caa2ecb5d *html/readVCFToListByRange.html
8e440343acc15b17d1ffafc306c05dd8 *html/readVCFToMatrixByGene.html
62e27ccdab933352fd747bdfc1c17b88 *html/readVCFToMatrixByRange.html
405bef344fa36e4bbb5f99f8eb7e06a8 *html/rvmeta.readCovByRange.html
e20123191c8089def461c86e77c570f4 *html/rvmeta.readDataByGene.html
e4844a4c1ecec0d4cd5363e49166e41e *html/rvmeta.readDataByRange.html
5121534fe958ca2ef9734dc0e2595ce2 *html/rvmeta.readNullModel.html
2e30a8a2b5c2f71e4b5b848013cbb135 *html/rvmeta.readScoreByRange.html
bde07b9f89fb751c6913d6e72ea42882 *html/rvmeta.readSkewByRange.html
7de1eff4836148b0709d6e6f229fe1fb *html/rvmeta.writeCovData.html
d359a57e846e67eb51aedb0d537ed041 *html/rvmeta.writeScoreData.html
b8def59402c356836f8ac3eb3cd6cc63 *html/sub-.PlinkFile.html
16dc838d6f0971b59744230a71635c4d *html/tabix.createIndex.html
9dfab064feb1e3df67dfbd5dc5c5f060 *html/tabix.createIndex.meta.html
15aa6bd20a75d02c13f0858e80e688a4 *html/tabix.createIndex.vcf.html
5eb8fce89cbd87d94288d10faa2a44ae *html/tabix.read.header.html
5b6063563ce9d4c3e3293786fdc83b5f *html/tabix.read.html
25719736c017775f43ac796b2dd1435d *html/tabix.read.table.html
e16ede53c291043a554c29e7a8422fe3 *html/validateAnnotationParameter.html
b52d936a8c1830dd5d70778915c7760a *html/verifyFilename.html
388d466d69440d05bc185cfcc3489d6c *html/writeWorkflow.html
3471b5d6f4f88f40cb49fd0eaa770198 *libs/x64/seqminer.dll
9ebec06f2cb97dcef8b5ada47369469a *plink/all.anno.filtered.extract.bed
0190a64ccb403c31bad91f3ee2e3c833 *plink/all.anno.filtered.extract.bim
614a24fccf790641566a70999938ee64 *plink/all.anno.filtered.extract.fam
751c636c82b643e5a9498591b5218032 *rvtests/cfh.refFlat.txt
b94af6795e947307028d232aee84d501 *rvtests/rvtest.MetaCov.assoc.gz
6ed4d335152649bfe88ce972d23440e5 *rvtests/rvtest.MetaCov.assoc.gz.tbi
6e9beac74bc1ec51eeead95a58c2e57c *rvtests/rvtest.MetaScore.assoc.anno.gz
543690c148fb9bccb7e8b3e05826f5f6 *rvtests/rvtest.MetaScore.assoc.anno.gz.tbi
f3c9e5e6899c4ad42aa59cb70084b6ee *rvtests/rvtest.MetaScore.assoc.gz
a5b24886972d5f229068eee3449f076c *rvtests/rvtest.MetaScore.assoc.gz.tbi
99237619851543e09bc2906e6a66c2d7 *rvtests/rvtest.MetaSkew.assoc.gz
a2d22ed038bcdd63b2200f8a495ce0d8 *rvtests/rvtest.MetaSkew.assoc.gz.tbi
e3b70c9d450ffc3505f6b60025605363 *tabanno/codon.txt
587f0fb382bf9328f31d9c0b48dc63ba *tabanno/input.100.vcf.gz
fdb819f529759c78b5023b530904974f *tabanno/input.demo.vcf
cddf8f9094beb0f87332bee2abb860b8 *tabanno/input.test.plain.txt
5da124f1fde1b084dafcf5a870f46b1e *tabanno/input.test.vcf
7e51a21043ce478b9cd506e0b8162697 *tabanno/priority.epact.txt
23e5d1b21219abad05b0503e88af00be *tabanno/priority.txt
e68c266d8b91871bee9d06053fc338b3 *tabanno/test.bed
d29bd9d0fefcb9559e3b3b649007b3b6 *tabanno/test.dbNSFP.gz
cead2c0cb02fe1fd2ed7cd610c38bc3d *tabanno/test.dbNSFP.gz.tbi
04b35b0c9a1d2799782d2ad34fa0684c *tabanno/test.fa
54932744e3eed15da9808ea28475cc98 *tabanno/test.fa.fai
ed581f9cebe1457335b2fd0463f88f58 *tabanno/test.gene.txt
1da7da33635f876f5633bee3f0225ed9 *tabanno/tmp.vcf
4a020714b9fa93eba566e0c2bb25086b *test-triallelic/bi.MetaCov.assoc.gz
2eee7ff9004abe2de40acde2760b5866 *test-triallelic/bi.MetaCov.assoc.gz.tbi
850b91847ee903f1fdd318aab9c9f0e5 *test-triallelic/bi.MetaScore.assoc.gz
68e1934efe879e01ac7da855d29e19f7 *test-triallelic/bi.MetaScore.assoc.gz.tbi
890073ddabccd2c71900390ae8000700 *test-triallelic/test2.study1.MetaCov.assoc.gz
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603e56109c44ed35b1ad1fe1d650ede2 *test-triallelic/test2.study2.MetaCov.assoc.gz
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337817ebcbac99199c69a28a3d492aa1 *test-triallelic/test2.study3.MetaCov.assoc.gz
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890073ddabccd2c71900390ae8000700 *test-triallelic/tri.MetaCov.assoc.gz
2f34c1346772b0f562538cde569d73f2 *test-triallelic/tri.MetaCov.assoc.gz.tbi
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8fe4f2a4966b755f39e1587d11efb046 *test-triallelic/tri.MetaScore.assoc.gz.tbi
03b777e22fde02a18b2f523ff327e2f2 *tests/correct.Rdata
e95e6420f0b8bdf2306dc87628a2c9b5 *vcf/1000g.phase1.20110521.CFH.var.anno.vcf.gz
8e1e8a6b0944b906b913d315aa4f8fe0 *vcf/1000g.phase1.20110521.CFH.var.anno.vcf.gz.tbi
30b34178034c34db61e46eeaf01fe863 *vcf/all.anno.filtered.extract.bcf.gz
da2e7fb5756f4e027cf076ddcdb5eade *vcf/all.anno.filtered.extract.bcf.gz.bci
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dadea91bf7fa4c1e93edf1c7cb08f7c2 *vcf/all.anno.filtered.extract.headerFixed.bcf.gz.scIdx
ca32db876ce78d2081fca12e46e1c115 *vcf/all.anno.filtered.extract.headerFixed.vcf.gz
a30627f5fed64983816d94ff2f90369c *vcf/all.anno.filtered.extract.vcf.gz
52e0fe3425c2c050045193e14a360262 *vcf/all.anno.filtered.extract.vcf.gz.scIdx
eebfb3d8260a7def9f29034931b7f9e2 *vcf/all.anno.filtered.extract.vcf.gz.tbi
9cc4f5122bb2e3b0b6b519f8c00d4fd7 *vcf/refFlat_hg19_6col.txt.gz
