R: Text representation of a sequence from an ACNUC server

prettyseq {seqinr} | R Documentation

## Text representation of a sequence from an ACNUC server

### Description

To get a text representation of sequence of rank `num` and of its subsequences, with `bpl` bases per line (default = 60), and with optional translation of protein-coding subsequences

### Usage

    prettyseq(num, bpl = 60, translate = TRUE, socket = autosocket())

### Arguments

`num` | rank of the sequence in the ACNUC database
`bpl` | number of base per line
`translate` | should coding sequences be translated?
`socket` | an object of class `sockconn` connecting to a remote ACNUC database (default is a socket to the last opened database).

### Value

An invisible vector of string. The output is redirected to the console.

### Author(s)

J.R. Lobry

### References

http://doua.prabi.fr/databases/acnuc.html

`citation("seqinr")`

### See Also

`choosebank`, `query`

### Examples

    ## Not run:
      ### Need internet connection
      choosebank("emblTP")
      prettyseq(111)

    ## End(Not run)

[Package seqinr version 3.4-5 Index]