R: Sequence coming from a remote ACNUC data base

SeqAcnucWeb {seqinr} | R Documentation

## Sequence coming from a remote ACNUC data base

### Description

`as.SeqAcnucWeb` is called by many functions, for instance by `query`, and should not be directly called by the user. It creates an object of class `SeqAcnucWeb`. `is.SeqAcnucWeb` returns TRUE if the object is of class `SeqAcnucWeb`.

### Usage

    as.SeqAcnucWeb(object, length, frame, ncbigc)
    is.SeqAcnucWeb(object)

### Arguments

`object` | a string giving the name of a sequence present in the data base
`length` | a string giving the length of the sequence present in the data base
`frame` | a string giving the frame of the sequence present in the data base
`ncbigc` | a string giving the ncbi genetic code of the sequence present in the data base

### Value

`as.SeqAcnucWeb` returns an object sequence of class `SeqAcnucWeb`. Note that as from seqinR 1.1-3 the slot socket has been deleted to save space for long lists.

### Author(s)

D. Charif, J.R. Lobry

### References

`citation("seqinr")`

### Examples

      ## Not run: # Need internet connection
      choosebank("emblTP")
      mylist <- query("mylist", "sp=felis catus et t=cds et o=mitochondrion")
      stopifnot(is.SeqAcnucWeb(mylist$req[[1]]))
      closebank()

    ## End(Not run)

[Package seqinr version 3.4-5 Index]