R: Weight of each synonymous codon

ucoweight {seqinr} | R Documentation

## Weight of each synonymous codon

### Description

Returns a list containing, for each of the 20 amino acids + STOP codon, the codon usage bias of each of the synonymous codon according to a given codon sequence.

### Usage

    ucoweight(sequence, numcode = 1)

### Arguments

`sequence` | A nucleic acids sequence
`numcode` | The genetic code number as in `translate`

### Value

a list containing, for each of the 20 amino acids and STOP codon (list tags), the weight of each synonymous codon (including the original one).

### Author(s)

L. Palmeira

### References

`citation("seqinr")`

### See Also

`synsequence`

### Examples

      data(ec999)
      ucoweight(ec999[1][[1]])

[Package seqinr version 3.4-5 Index]