R: as.matrix.alignment

as.matrix.alignment {seqinr} | R Documentation

## as.matrix.alignment

### Description

Converts an alignment into a matrix of characters

### Usage

    ## S3 method for class 'alignment'
    as.matrix(x, ...)

### Arguments

`x` | an object of the class alignment.
`...` | additional arguments to be passed to or from methods.

### Value

A matrix of characters.

### Author(s)

J.R. Lobry

### See Also

`read.alignment`

### Examples

      phylip <- read.alignment(file = system.file("sequences/test.phylip",
       package = "seqinr"), format = "phylip")
      as.matrix(phylip)

[Package seqinr version 3.4-5 Index]