R: Collapse count matrices by cell type, given min/max number of...

collapseCellsByType {sccore} | R Documentation

## Collapse count matrices by cell type, given min/max number of cells

### Description

Collapse count matrices by cell type, given min/max number of cells

### Usage

    collapseCellsByType(cm, groups, min.cell.count = 10, max.cell.count = Inf)

### Arguments

`cm` | count matrix
`groups` | factor specifying cell types
`min.cell.count` | numeric Minimum number of cells to include (default=10)
`max.cell.count` | numeric Maximum number of cells to include (default=Inf). If Inf, there is no maximum.

### Value

Subsetted factor of collapsed cells by type, with NA cells omitted

[Package sccore version 1.0.1 Index]