rhoScores {RobustRankAggreg}R Documentation

Calculate rho scores

Description

Calculate Rho score for normalized rank vector

Usage

  rhoScores(r, topCutoff = NA, exact = F)

Arguments

r

vector of values in [0, 1]

topCutoff

a vector of cutoff values used to limit the number of elements in the input lists

exact

indicator if exact p-values should be calculated (Warning: it is computationally unstable and does ot give considerable gain)

Details

Takes in a vector with values in [0, 1]. Applies betaScores to the vector, takes the minimum of the beta scores and converts it to a valid p-value.

Author(s)

Raivo Kolde <rkolde@gmail.com>

References

Kolde et al "Robust Rank Aggregation for gene list integration and meta-analysis" (in preparation)

Examples

rhoScores(c(runif(15)))
 rhoScores(c(runif(10), rbeta(5, 1, 50)))

[Package RobustRankAggreg version 1.1 Index]