R: Cytoband Inforamtion for Mouse Chromosome Ideogram

UCSC.Mouse.GRCm38.CytoBandIdeogram {RCircos} | R Documentation

## Cytoband Inforamtion for Mouse Chromosome Ideogram

### Description

A data frame containing chromosome name, start and end position, band name, and intensity of Giemsa stains for each cytoband.

### Usage

    data(UCSC.Mouse.GRCm38.CytoBandIdeogram)

### Format

A data frame with 403 observations on the following 5 variables.

`Chromosome`

  a factor with levels `chr1` `chr10` `chr11` `chr12` `chr13` `chr14` `chr15` `chr16` `chr17` `chr18` `chr19` `chr2` `chr3` `chr4` `chr5` `chr6` `chr7` `chr8` `chr9` `chrX` `chrY`

`ChromStart`

  a numeric vector

`ChromEnd`

  a numeric vector

`Band`

  a factor with levels `qA` `qA1` `qA1.1` `qA1.2` `qA1.3` `qA2` `qA3` `qA3.1` `qA3.2` `qA3.3` `qA4` `qA5` `qA5.1` `qA5.2` `qA5.3` `qA6` `qA7.1` `qA7.2` `qA7.3` `qB` `qB1` `qB1.1` `qB1.2` `qB1.3` `qB2` `qB2.1` `qB2.2` `qB2.3` `qB3` `qB3.1` `qB3.2` `qB3.3` `qB4` `qB5` `qB5.1` `qB5.2` `qB5.3` `qC` `qC1` `qC1.1` `qC1.2` `qC1.3` `qC2` `qC3` `qC3.1` `qC3.2` `qC3.3` `qC4` `qC5` `qC6` `qC7` `qD` `qD1` `qD2` `qD2.1` `qD2.2` `qD2.3` `qD3` `qE` `qE1` `qE1.1` `qE1.2` `qE1.3` `qE2` `qE2.1` `qE2.2` `qE2.3` `qE3` `qE3.1` `qE3.2` `qE3.3` `qE4` `qE5` `qF` `qF1` `qF2` `qF2.1` `qF2.2` `qF2.3` `qF3` `qF4` `qF5` `qG1` `qG1.1` `qG1.2` `qG1.3` `qG2` `qG3` `qH1` `qH2` `qH2.1` `qH2.2` `qH2.3` `qH3` `qH4` `qH5` `qH6`

`Stain`

  a factor with levels `gneg` `gpos100` `gpos33` `gpos66` `gpos75`

### Source

http://genome.ucsc.edu

[Package RCircos version 1.2.0 Index]