R: Get the Layer Numbers for Tile Plot

RCircos.Get.Plot.Layers {RCircos} | R Documentation

## Get the Layer Numbers for Tile Plot

### Description

Check out overlaps between different genomic positions on same chromosome and set up layer numbers for each line of the genomic data.

### Usage

    RCircos.Get.Plot.Layers(genomic.data=NULL, genomic.columns=NULL)

### Arguments

`genomic.data` | A data frame with genomic positions (chromosomes, start and end positions) and the positions should be already validated and sorted by chromosome then start position.
`genomic.columns` | Non-negative integer, total number of columns for genomic positions.

### Value

A non-negative integer vector with length same as the total rows of input data.

### Author(s)

Henry Zhang

### Examples

    library(RCircos)
    data(RCircos.Tile.Data)
    layers <- RCircos.Get.Plot.Layers(RCircos.Tile.Data, 3)

[Package RCircos version 1.2.0 Index]