Arith-methods           Arithmetic with Raster* objects
Compare-methods         Compare Raster* objects
Extent-class            Class "Extent"
Geary                   Spatial autocorrelation
KML                     Write a KML or KMZ file
Logic-methods           Logical operators and functions
Math-methods            Mathematical functions
NAvalue                 Set the NA value of a RasterLayer
RGB                     Create a Red-Green-Blue Raster object
Raster-class            Raster* classes
Summary-methods         Summary methods
Which                   Which cells are TRUE?
[<-,RasterLayer,RasterLayer,missing-method
                        Replace cell values or layers of a Raster*
                        object
[[,Raster,ANY,ANY-method
                        Indexing to extract values of a Raster* object
addLayer                Add or drop a layer
adjacent                Adjacent cells
aggregate               Aggregate raster cells or SpatialPolygons/Lines
alignExtent             Align an extent (object of class Extent)
animate                 Animate layers of a Raster* object
approxNA                Estimate values for cell values that are 'NA'
                        by interpolating between layers
area                    Size of cells
as.data.frame           Get a data.frame with raster cell values, or
                        coerce SpatialPolygons, Lines, or Points to a
                        data.frame
as.list,Raster-method   Create a list of RasterLayer objects
as.logical,Raster-method
                        Change cell values to logical or integer values
as.matrix               Get a vector, matrix, or array with raster cell
                        values
as.raster               Coerce to a 'raster' object
atan2                   Two argument arc-tangent
bandnr                  Number of bands
barplot                 Bar plot of a RasterLayer
beginCluster            Use a multi-core cluster
bind                    Bind Spatial* objects
blockSize               Block size for writing files
boundaries              boundaries (edges) detection
boxplot                 Box plot of Raster objects
brick                   Create a RasterBrick object
buffer                  buffer
calc                    Calculate
cellFromRowCol          Get cell, row, or column number
cellStats               Statistics across cells
cellsFromExtent         Cells from Extent
clamp                   Clamp values
clearValues             Clear values
click                   Query by clicking on a map
clump                   Detect clumps
colortable              colortable
compareCRS              Partially compare two CRS objects
compareRaster           Compare Raster objects
contour                 Contour plot
corLocal                Local correlation coefficient
cover                   Replace NA values with values of other layers
crop                    Crop
crosstab                Cross-tabulate
cut                     Convert values to classes
cv                      Coefficient of variation
dataSize                Raster file properties
dataType                Data type
density                 Density plot
dim                     Dimensions of a Raster* object
direction               Direction
disaggregate            Disaggregate
distance                Distance
distanceFromPoints      Distance from points
drawExtent              Create an Extent object by drawing on a map
drawPoly                Draw a line or polygon
erase                   Erase parts of a Spatial* object
extend                  Extend
extension               Filename extensions
extent                  Extent
extract                 Extract values from Raster objects
filename                Filename
filledContour           Filled contour plot
flip                    Flip
floor,Extent-method     round Extent coordinates
flowPath                Flow path
focal                   Focal values
focalWeight             Focal weights matrix
freq                    Frequency table
fromDisk                Are values in memory and/or on disk?
gain                    Gain and offset of values on file
geom                    Get the coordinates of a vector type Spatial*
                        object
getData                 Get geographic data
getValues               Get raster cell values
getValuesBlock          Get a block of raster cell values
getValuesFocal          Get focal raster cell values
getZ                    Get or set z-values
gridDistance            Distance on a grid
hdr                     Header files
head                    Show the head or tail of a Raster* object
hillShade               Hill shading
hist                    Histogram
image                   Image
init                    Intitialize a Raster object with values
interpolate             Interpolate
intersect               Intersect
is.factor               Factors
isLonLat                Is this longitude/latitude data?
layerStats              Correlation and (weighted) covariance
layerize                Layerize
localFun                Local functions
mask                    Mask values in a Raster object
match                   Value matching for Raster* objects
merge                   Merge Raster* objects
metadata                Metadata
minValue                Minimum and maximum values
modal                   modal value
mosaic                  Merge Raster* objects using a function for
                        overlapping areas
movingFun               Moving functions
names                   Names of raster layers
ncell                   Number or rows, columns, and cells of a Raster*
                        object
nlayers                 Number of layers
origin                  Origin
overlay                 Overlay Raster objects
pairs                   Pairs plot (matrix of scatterplots)
persp                   Perspective plot
plot                    Plot a Raster* object
plotRGB                 Red-Green-Blue plot of a multi-layered Raster
                        object
pointDistance           Distance between points
predict                 Spatial model predictions
projectRaster           Project a Raster object
projection              Get or set a coordinate reference system
                        (projection)
quantile                Raster quantiles
raster                  Create a RasterLayer object
raster-package          Overview of the functions in the raster package
rasterFromCells         Subset a raster by cell numbers
rasterFromXYZ           Create a Raster* object from x, y, z values
rasterOptions           Global options for the raster package
rasterTmpFile           Temporary files
rasterToContour         Raster to contour lines conversion
rasterToPoints          Raster to points conversion
rasterToPolygons        Raster to polygons conversion
rasterize               Rasterize points, lines, or polygons
readAll                 Read values from disk
readIniFile             Read a .ini file
readStart               Helper functions for programming
reclassify              Reclassify
rectify                 rectify a Raster object
resample                Resample a Raster object
rotate                  Rotate
rotated                 Do the raster cells have a rotation?
round,RasterLayer-method
                        Integer values
rowFromCell             Row or column number from a cell number
rowSums                 rowSums and colSums for Raster objects
sampleInt               Sample integer values
sampleRandom            Random sample
sampleRegular           Regular sample
sampleStratified        Stratified random sample
scale                   Scale values
scalebar                scalebar
select                  Geometric subsetting
setExtent               Set the extent of a RasterLayer
setMinMax               Compute min and max values
setValues               Set values of a Raster object
shapefile               Read or write a shapefile
shift                   Shift
slopeAspect             Slope and aspect
spLines                 Create SpatialLines* or SpatialPolygons*
spplot                  Use spplot to plot a Raster* object
stack                   Create a RasterStack object
stackApply              Apply a function on subsets of a RasterStack or
                        RasterBrick
stackSave               Save or open a RasterStack file
stackSelect             Select cell values from a multi-layer Raster*
                        object
stretch                 Stretch
subs                    Substitute values in a Raster* object
subset                  Subset layers in a Raster* object
summary,RasterLayer-method
                        Summary
symdif                  Symetrical difference
t                       Transpose
terrain                 Terrain characteristics
text                    Add labels to a map
trim                    Trim
union                   Union Extent or SpatialPolygons* objects
unique                  Unique values
unstack                 Unstack
update                  Update raster cells of files (on disk)
validCell               Validity of a cell, column or row number
validNames              Create valid names
weighted.mean           Weighted mean of rasters
which.min               Where is the min or max value?
writeFormats            File types for writing
writeRaster             Write raster data to a file
writeValues             Write values to a file
xmin                    Coordinates of the Extent of a Raster object
xres                    Resolution
xyFromCell              Coordinates from a row, column or cell number
zApply                  z (time) apply
zonal                   Zonal statistics
zoom                    Zoom in on a map
