aicVC                   AIC Model Selection
blup                    Best Linear Unbiased Prediction
cic                     Calculate Jacquard condensed identity
                        coefficients
estVC                   Estimate Variance Component Parameters
fv                      A collection of other functions.
genMatrix               Derive genetic matrices
genoImpute              Impute Genotypic Data
genoProb                Probability of a Genotype.
genoSim                 Generate Genotypic Data
gls                     Generalized Least Squares Estimates
hapSim                  Generate Genotypic Data
ibs                     Estimate Jacquard condensed identity
                        coefficients
kinship                 Calculate kinship coefficients
lodci                   Estimate LOD Support Intervals
mAIC                    Multiple QTL AIC
miscEx                  Genotype data, phenotype data, genetic map and
                        pedigree.
nullSim                 Simulate null distribution
pedRecode               Recode a Pedigree
plotit                  Plotting
qqPlot                  Quantile-Quantile Plots
qtl2rel                 Convert data from R/qtl to QTLRel format
qtlVar                  QTL Variance
rel2qtl                 Convert data from QTLRel to R/qtl format
rem                     Random effect matrices
scanOne                 Genome Scan for QTL
scanTwo                 Genome Scan for Epistasis
