R: Split taxonomic assignment strings

split_assignments {qiimer}

R Documentation

Split taxonomic assignment strings

Split taxonomic assignment strings

split_assignments(assignments, ranks = taxonomic_ranks, split = "; ", ...)

`assignments`	Character vector of taxonomic assignments.
`ranks`	Character vector of taxonomic ranks, used as column names in the resultant data frame.
`split`	Pattern on which to split taxa in assignment strings.
`...`	Additional parameters are passed to the `strsplit` function.

A data frame of taxonomic assignments.

data(relmbeta_assignments)
a <- split_assignments(relmbeta_assignments)
head(a)

[Package qiimer version 0.9.4 Index]