rarefaction_stats {qiimer}R Documentation

Compute summary statistics for collated alpha diversity tables.

Description

Compute summary statistics for collated alpha diversity tables.

Usage

rarefaction_stats(rarefaction_table)

Arguments

rarefaction_table

A collated alpha diversity data frame.

Value

A data frame of summary statistics, with columns 'SampleID', 'sequences_per_sample', 'diversity.mean', and 'diversity.sd'.

Examples

data(relmbeta_alpha)
head(rarefaction_stats(relmbeta_alpha))

[Package qiimer version 0.9.4 Index]