R: FASTA format reader

Fasta {protViz} | R Documentation

## FASTA format reader

### Description

Implements as Rcpp module performing tryptic digests and summaries. The support is limited for protein sequences.

### Usage

    Fasta

### Value

returns a `list` or `vector` objects.

### Author(s)

Christian Panse <cp@fgcz.ethz.ch> 2006-2017

### References

https://en.wikipedia.org/wiki/FASTA_format

### Examples

    # >sp|P12763|FETUA_BOVIN Alpha-2-HS-glycoprotein OS=Bos taurus
      fname <- system.file("extdata", name='P12763.fasta', package = "protViz")
      F <- Fasta$new(fname)
      F
      F$summary()
      F$getTrypticPeptides()

[Package protViz version 0.2.45 Index]