R: Mass Deviation Plot

massDeviationPlot {protViz} | R Documentation

## Mass Deviation Plot

### Description

`massDeviationPlot` computes the mass deviation of a data set having the list attributes `pepmass` and `peptideSequence`.

### Usage

        mdp(data, sub)

### Arguments

`data` | an R data object as it can be obtained by `mascotDat2RData.pl`
`sub` | a sub title for the plot

### Details

In this version it igrnoes modified peptides.

### Author(s)

Christian Panse 2012-2013;

### References

Zubarev R, Mann M. On the proper use of mass accuracy in proteomics. Mol Cell Proteomics. 2007 Mar;6(3):377-81. Epub 2006 Dec 12. PMID: 17164402

### Examples

        # load("F178767.Rdata")
        # pdf("massError.pdf",12,9)
        # massDeviationPlot (F178767)
        # dev.off()

[Package protViz version 0.2.45 Index]