R: Update FDR by Permutation

updateCutoffs {propr} | R Documentation

## Update FDR by Permutation

### Description

This function updates FDR for a set of cutoffs.

### Usage

    updateCutoffs(object, cutoff = seq(0.05, 0.95, 0.3), ncores = 1)

### Arguments

`object` | A `propr` or `propd` object.
`cutoff` | For `updateCutoffs`, a numeric vector. this argument provides the FDR cutoffs to test. For graph functions, a numeric scalar. This argument indicates the maximum theta to include in the figure. For graph functions, a large integer will instead retrieve the top N pairs as ranked by theta.
`ncores` | An integer. The number of parallel cores to use.

### Details

This function wraps `updateCutoffs.propr` and `updateCutoffs.propd`.

### Value

A `propr` or `propd` object.

[Package propr version 4.2.6 Index]