R: Update FDR by Permutation

updateCutoffs {propr}

R Documentation

Update FDR by Permutation

This function updates FDR for a set of cutoffs.

updateCutoffs(object, cutoff = seq(0.05, 0.95, 0.3), ncores = 1)

`object`	A `propr` or `propd` object.
`cutoff`	For `updateCutoffs`, a numeric vector. this argument provides the FDR cutoffs to test. For graph functions, a numeric scalar. This argument indicates the maximum theta to include in the figure. For graph functions, a large integer will instead retrieve the top N pairs as ranked by theta.
`ncores`	An integer. The number of parallel cores to use.

This function wraps updateCutoffs.propr and updateCutoffs.propd.

A propr or propd object.

[Package propr version 4.2.6 Index]