slate {propr}R Documentation

Build propr Results Table

Description

Builds a table of VLR, VLS, and proportionality for each feature pair in a propr object. If the argument k is provided, the table will also include co-cluster membership. Returns a data.frame of all pairwise relationships. If the argument k is provided, returns a list of the data.frame of pairwise relationships and the cluster membership.

Usage

slate(rho, k, prompt = TRUE, plotly = FALSE)

Arguments

rho

A propr or propd object.

k

An integer. For propr methods, the number of co-clusters (where all pairs receive a specified color if and only if both members belong to same the cluster). For propd methods, the maximum number of PALs to index when calculating pals in the network.

prompt

A logical scalar. Set to FALSE to disable the courtesy prompt when working with big data.

plotly

A logical scalar. Set to TRUE to produce a dynamic plot using the plotly package.

[Package propr version 4.2.6 Index]