R: k-mer counts of a metagenomic data

SRR061157_k31 {preseqR} | R Documentation

## k-mer counts of a metagenomic data

### Description

The k-mer counts are based on a metagenome sequencing data from Human Microbiome Project with the accession number SRR061157. Only forward reads are used to generate the k-mer counts.

### Details

A two-column matrix. The first column is the frequency j = 1,2,…; and the second column is N_j, the number of 31-mers observed exactly j times.

### References

Human Microbiome Project (https://hmpdacc.org/).

### Examples

    ##load library
    library(preseqR)

    ##load data
    data(SRR061157_k31)

[Package preseqR version 4.0.0 Index]