coefficient_path {PLNmodels}R Documentation

Extract the regularization path of a PLNnetwork fit

Description

Extract the regularization path of a PLNnetwork fit

Usage

coefficient_path(Robject, precision = TRUE, corr = TRUE)

Arguments

Robject

an object with class PLNnetworkfamily, i.e. an output from PLNnetwork()

precision

a logical, should the coefficients of the precision matrix Omega or the covariance matrix Sigma be sent back. Default is TRUE.

corr

a logical, should the correlation (partial in case precision = TRUE) be sent back. Default is TRUE.

Value

Sends back a tibble/data.frame.

Examples

data(trichoptera)
trichoptera <- prepare_data(trichoptera$Abundance, trichoptera$Covariate)
fits <- PLNnetwork(Abundance ~ 1, data = trichoptera)
head(coefficient_path(fits))
[Package PLNmodels version 0.11.4 Index]