R: Actualization of the enumeration.

update.enumerate_parsimony {PhylogeneticEM} | R Documentation

## Actualization of the enumeration.

### Description

`update.enumerate_parsimony` is used in function `enumerate_parsimony`, and compute the solution for the parent node, given its children.

### Usage

    update.enumerate_parsimony(daughters, daughtersParams, parent, cost, clus, pos,
      ...)

### Arguments

`daughters` | vector of daughters nodes.
`daughtersParams` | list with length(daughters) entries, each entry being a list of k matrices representing the possible allocations starting from daughter.
`parent` | the parent node.

### Details

This function takes a list with L entries corresponding to the children of a node, and compute, for all the regimes, the possible allocations starting with parent node in that regime. It uses functions `select.matrices` to select the possible states of the children, and `matrix_of_possibles` to find the possible states.

### Value

A list of size nclus, each entry being a matrix representing the possible allocations starting with node parent in state k.

[Package PhylogeneticEM version 1.1.0 Index]