update.incidence.matrix.full {PhylogeneticEM}R Documentation

Update function for incidence matrix

Description

update.incidence.matrix.full updates the matrix initialized in init.incidence.matrix.full for the computation of the incidence matrix in incidence.matrix.full.

Usage

update.incidence.matrix.full(daughtersParams, parent, ...)

Arguments

daughtersParams

: rows of updated matrix corresponding to the daughters of the current node.

Details

A node belongs to all the lineages of its daughters.

Value

Vector of length ntaxa + nNodes, indicating to which lineages the branch above the current node belongs to.

[Package PhylogeneticEM version 1.1.0 Index]