sum.partitions.cardFixed {PhylogeneticEM}R Documentation

Sum on subsets of a given cardinal.

Description

sum.partitions.cardFixed returns the sum on I subset of [1,p], |I| fixed, of the sums computed by sum.prod.comb.

Usage

## S3 method for class 'partitions.cardFixed'
sum(A, N, K, p, cardI)

Arguments

A

a matrix with p rows and K column. Each row contains the number of marked partition in 1<=k<=K groups for one of the p children of a given node.

N

a matrix with p rows and K column. Each row contains the number of partition in 1<=k<=K groups for one of the p children of a given node

K

an integer. The number of groups wanted.

p

an integer. The number of daughters of a node.

cardI

an integer. The cardinal of the subset wanted.

Details

This function uses combn to enumerate all the subsets I of [1,p] of a given cardinal, and then performs the wanted sum on these subsets.

Value

double : the result of the sum.


[Package PhylogeneticEM version 1.1.0 Index]