R: Code Types of Dataset and Substitution Models

.code.type {phyclust} | R Documentation

## Code Types of Dataset and Substitution Models

### Description

Indicate the types of codes for datasets and functions. The first element is the default value. This is a read-only object and the elemental order is followed in C.

### Usage

    .code.type

### Format

A character vector contains implemented code types in C.

### Details

Two possible types are implemented, "NUCLEOTIDE" (default) and "SNP", used in data transfers and indicating substitution models.

### Author(s)

Wei-Chen Chen wccsnow@gmail.com

### References

Phylogenetic Clustering Website: https://snoweye.github.io/phyclust/

### See Also

`.show.option`, `.substitution.model`, `.EMControl`, `phyclust`.

### Examples

    ## Not run:
    library(phyclust, quiet = TRUE)

    .code.type

    ## End(Not run)

[Package phyclust version 0.1-30 Index]