R: Evolution Distance Model

.edist.model {phyclust} | R Documentation

## Evolution Distance Model

### Description

Evolution distances based on certain evolution models as in ape. The implemented model is used in `phyclust.edist` and initializations of EM algorithms. The first element is the default value. This is a read-only object and the elemental order is followed in C.

### Usage

    .edist.model

### Format

A character vector contains implemented evolution distances in C.

### Details

This vector stores possible evolution distances implemented in phyclust. The default value is `D_JC69` computed form the probability of JC69 model.

### Author(s)

Wei-Chen Chen wccsnow@gmail.com

### References

Phylogenetic Clustering Website: https://snoweye.github.io/phyclust/

### See Also

`.show.option`, `phyclust.edist`.

### Examples

    ## Not run:
    library(phyclust, quiet = TRUE)

    .edist.model

    ## End(Not run)

[Package phyclust version 0.1-30 Index]