e7a4016a58bcd7e93b1bbfa53559b457 *CITATION
16d9435ee071381854695fc7da1ca589 *DESCRIPTION
0dd7541020b86a8e88ba9ff6aab87f6a *INDEX
c1225adf2fc48ff3e14d589cbf1348e3 *Meta/Rd.rds
3d2d3d3b6a70361eda18d76e8fb6766d *Meta/data.rds
104d433669a37420724bd986c19a450b *Meta/features.rds
0483cf787a2a333db81c0c02338055da *Meta/hsearch.rds
04d8629ebd6d798f4982d575053519b5 *Meta/links.rds
db88c5007e771a94eb93bc389e85445b *Meta/nsInfo.rds
a56b6c5ada118d8795fe9b80312f1192 *Meta/package.rds
1c39be9b65b90e5a0308aa7e528bf05d *Meta/vignette.rds
ac582496143ad979199e14e5df1f6921 *NAMESPACE
ed1064a73931df6cd02237ff2f351c60 *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/phangorn
93724791f0725413e5ca9536afd8798f *R/phangorn.rdb
965dac4da242b81830e6bd938495d0fc *R/phangorn.rdx
29c14b68adf3a93549af2992fa4020e4 *R/sysdata.rdb
e619fda6c4e68f5680d43839c9f87682 *R/sysdata.rdx
61b3722df2ead748e0db8595428412a1 *README
4a92b07bcd170e85bd237e460acafa93 *data/Laurasiatherian.RData
4b269c2e640293341b9b1c04d4dd7f4e *data/chloroplast.RData
19f84425e8caaf9f605490cdff17dd81 *data/yeast.RData
cb46987c27f89786e6e01b35c5d40a29 *doc/AdvancedFeatures.R
8fcd73224853fbde6b8e2f5f1f5b9573 *doc/AdvancedFeatures.Rmd
8fb6b0aec6e3d220cb0a92abbdee5da8 *doc/AdvancedFeatures.html
a1acd1e6c375ca1d707f08879a266709 *doc/Ancestral.R
60c82ad4aa2e22c6fb220b0f61d83332 *doc/Ancestral.Rmd
82fd1cc61a2ab15f39aef078c3af22ca *doc/Ancestral.html
9c1bbf302b462611ece066597e8d89da *doc/IntertwiningTreesAndNetworks.R
00bef846273254282f2091ef7c30fc7d *doc/IntertwiningTreesAndNetworks.Rmd
46f6a903b57bd8d37c2c0611efdfeada *doc/IntertwiningTreesAndNetworks.html
ed931565687ee9e4ed7fb1e62dd9a2d5 *doc/Networx.R
01d7816efe646b305a6b68a402f7930e *doc/Networx.Rmd
6ec8cbd5aea27644b087ec508a6e2079 *doc/Networx.html
8a6c24c05ead3aa80577583aac9f440e *doc/Trees.R
f575822e4f6f33118764de5d2d0c5946 *doc/Trees.Rmd
6ce24be585d975cad4aeaec8273db5e7 *doc/Trees.html
10fc77350601ec81a0bbcdc36ff0c527 *doc/index.html
3009f9da02a198cb557d435cc5ad8c7f *extdata/Blosum62.dat
72f496d4c6e937ffe744d25bd8891313 *extdata/Dayhoff.dat
5aa357dab0e72b27023e4302bc37dbad *extdata/FLU.dat
7f63f617d5d29421b0bd90ab8511feb7 *extdata/HIVb.dat
29e1aa10906a86bb9bca6d9c7f98a6cb *extdata/HIVw.dat
ca86e539345fa57de5c77a60308bed09 *extdata/JTT.dat
fdc1176d0c0f2db3de1c9dfd83d3c070 *extdata/MtZoa.dat
106715eba35efc2743ccad7923ac13ce *extdata/RtREV.dat
e05f5a0ca507e4e15e7b95d1ce93b9fa *extdata/VT.dat
fc090d051ce4f18b937448a254e2764e *extdata/cpREV.dat
50c707c26bf9015b37670f15d5e1c14b *extdata/dayhoff-dcmut.dat
6da24109959f0c7a7db50c8db78d5d42 *extdata/jtt-dcmut.dat
ddc4bd45521cd72848aaf2f79b90ac6e *extdata/lg.dat
917303a3df098f9137c651de0afa78fa *extdata/mtArt.dat
1cd5e39670b86d32b5fe5c27dcc79648 *extdata/mtREV24.dat
0ca0d0e987fcebf847a876779eddd934 *extdata/mtmam.dat
20be734137b889e34006f8b8bd969054 *extdata/trees/RAxML_bestTree.3moles
384aa1b8d633aa8c9f533396bd6798cb *extdata/trees/RAxML_bestTree.AIs
757e4718b72d7829b5ceb34f765dc626 *extdata/trees/RAxML_bestTree.Wang.out
5c7b80221c2dc93d4e6a6b857ccb62e8 *extdata/trees/RAxML_bestTree.YCh
0e77d8f9386ddaee1de2f6678530c823 *extdata/trees/RAxML_bestTree.mtG
2f7670326d5ff9235ecd0943944b6d59 *extdata/trees/RAxML_bipartitions.3moles
959bc9ea585c21ab89b3f32a5bb49d25 *extdata/trees/RAxML_bipartitions.AIs
46c172becde7e1d90ab68820b0c48822 *extdata/trees/RAxML_bipartitions.YCh
75061d3e313e19632dcbce0ef48e9cdc *extdata/trees/RAxML_bipartitions.mtG
2212d49c7269978890887be3686c12f9 *extdata/trees/RAxML_bipartitions.woodmouse
b1b3ceb83427c63fed23790fd563ef6e *extdata/trees/RAxML_bipartitionsBranchLabels.3moles
41fd855853c4ceb7e28d5212b1c72d9b *extdata/trees/RAxML_bipartitionsBranchLabels.AIs
0d8694f8ea078f981819be215fb724ba *extdata/trees/RAxML_bipartitionsBranchLabels.YCh
abcfbaf31212288e26a67c5b6c30ae70 *extdata/trees/RAxML_bipartitionsBranchLabels.mtG
25077ff0b9f822583f5ae13d8bbc181a *extdata/trees/RAxML_bootstrap.3moles
bd830645e73afa0ee2cb121c22c4d2f2 *extdata/trees/RAxML_bootstrap.AIs
086fb65b6bd2d40f09fff513b86d55cc *extdata/trees/RAxML_bootstrap.Wang.out
49ade6ade3f8f08033b887a001243c86 *extdata/trees/RAxML_bootstrap.YCh
d2016de5a6926dd0b62c49502ec2d6b9 *extdata/trees/RAxML_bootstrap.mtG
000df141b844795d38e5a755aa360f97 *extdata/trees/RAxML_bootstrap.woodmouse
6cd945acf5464dce8e10c350097e2c20 *extdata/trees/RAxML_distances.Wang.nxs
02888c45178001387b7a5397a3a17d3c *extdata/trees/Splits.txt
d3069d1eff9e70bed655b8962bf4ee2b *extdata/trees/primates.dna
129e8c41182f3557b1b9911625e100b9 *extdata/trees/woodmouse.fasta
421488c1ce8687879f64a350fca6d055 *extdata/trees/woodmouse.mrbayes.nex.con
d83fc4958acba1f1d0ca4092393c5b3d *extdata/trees/woodmouse.mrbayes.nex.run1.t
e185a8c9c7aed17a3e216cb78d517fd4 *extdata/trees/woodmouse.mrbayes.nex.run2.t
01399608c5cc2927ebed0659ac78863d *extdata/trees/woodmouse.nxs
87fa1533c4dfe7074237cfa2196bcbeb *extdata/wag.dat
2095ffd25908d93d668194717d6d8831 *help/AnIndex
1f76025b5262d542ca72b6621a29307d *help/aliases.rds
5e5c9da6e7ba15b472b9ea3958876662 *help/figures/phangorn_sticker.png
a17f0625dfc27ac4a7d277037edeb4a1 *help/paths.rds
c4a3d8eb9b22a8c7073f6a30e8657c15 *help/phangorn.rdb
b11a1826d517fce2d310b6e80ef8ea53 *help/phangorn.rdx
09555ceac9d585dc02dad99d15072e59 *html/00Index.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
c2ca2b8cc1eb9a372d931330f15f59b8 *libs/x64/phangorn.dll
5e5c9da6e7ba15b472b9ea3958876662 *phangorn_sticker.png
b3ce1bb1450b5e60d76e7e7d9c5db9ce *tinytest/test_Clanistics.R
47e00e8bb86bf7f5c0ee0397941f8cfd *tinytest/test_SH.R
aeaf624004c9e9dcf9265ea47c09389d *tinytest/test_ancestral.R
2a2e8514a73ba4a02d62d9a0cd36e7be *tinytest/test_bootstrap.R
4fd1391e9729fe532820bcbe2f0a5507 *tinytest/test_codon.R
743a9027424289cd96655ed0ea1032cb *tinytest/test_dist_tree.R
91e058d223bee69969650e223cc0bfa0 *tinytest/test_distances.R
003cf27799c5f9ac3c125e9dbdd94151 *tinytest/test_hadamard.R
49bec950fdf8ff6034c263a231e3bfe3 *tinytest/test_mast.R
5c5ed9e329e1a0b5ace0ca7328179457 *tinytest/test_modelTest.R
66273dcf2a72d28287b6179dfbbaa28b *tinytest/test_parsimony.R
db95098670cfa6c0d3400238ae48fbe1 *tinytest/test_phyDat.R
c908e4255e504e1a783fcf09bd1c32cc *tinytest/test_pml.R
6baabdc92fd297936eb619837320ef35 *tinytest/test_pmlCluster.R
7dda65073f8a0ad4017e9bf4e4e1f71d *tinytest/test_pmlMix.R
5f94576ee5e9a927833da9c1bc336a02 *tinytest/test_pmlPart.R
66a962bcc703434a9afff9b4d05168ea *tinytest/test_pmlPen.R
9fb0c7de01dc40a4eac7d8231c858fa7 *tinytest/test_speciesTree.R
1b7e16921bc9041df2c62f3686721553 *tinytest/test_splits.R
dcac0cc9fbe28aeda00dd6a1bc9f2121 *tinytest/test_superTree.R
91f54f28928a7ce4bc48f00718838e6f *tinytest/test_treeManipulation.R
3645bdd96f541961003448d89470e64e *tinytest/test_treeRearrangement.R
9342744307dbafb5d6db1b02d44a0482 *tinytest/test_treedist.R
