R: Compute all trees topologies.

allTrees {phangorn} | R Documentation

## Compute all trees topologies.

### Description

`allTrees` computes all tree topologies for rooted or unrooted trees with up to 10 tips. `allTrees` returns bifurcating trees.

### Usage

    allTrees(n, rooted = FALSE, tip.label = NULL)

### Arguments

`n` | Number of tips (<=10).
`rooted` | Rooted or unrooted trees (default: rooted).
`tip.label` | Tip labels.

### Value

an object of class `multiPhylo`.

### Author(s)

Klaus Schliep klaus.schliep@gmail.com

### See Also

`rtree`, `nni`

### Examples

    trees <- allTrees(5)

    old.par <- par(no.readonly = TRUE)
    par(mfrow = c(3,5))
    for(i in 1:15)plot(trees[[i]])
    par(old.par)

[Package phangorn version 2.6.2 Index]