R: Jaguar Micro-Satellites

jaguar {pegas} | R Documentation

## Jaguar Micro-Satellites

### Description

Fifty nine jaguars (Panthera onca) from four populations genotyped at thirteen micro-satellites by Haag et al. (2010).

### Usage

    data(jaguar)

### Format

An object of class `"loci"` with 59 rows and 14 columns.

### Source

Haag, T., Santos, A. S., Sana, D. A., Morato, R. G., Cullen, Jr., L., Crawshaw, Jr., P. G., De Angelo, C., Di Bitetti, M. S., Salzano, F. M. and Eizirik, E. (2010) The effect of habitat fragmentation on the genetic structure of a top predator: loss of diversity and high differentiation among remnant populations of Atlantic Forest jaguars (Panthera onca). Molecular Ecology, 22, 4906–4921.

Haag, T., Santos, A. S., Sana, D. A., Morato, R. G., Cullen, Jr., L., Crawshaw, Jr., P. G., De Angelo, C., Di Bitetti, M. S., Salzano, F. M. and Eizirik, E. (2010) Data from: The effect of habitat fragmentation on the genetic structure of a top predator: loss of diversity and high differentiation among remnant populations of Atlantic Forest jaguars (Panthera onca). Dryad Digital Repository. doi: 10.5061/dryad.1884

### See Also

`loci`, `alleles2loci`

The vignette “ReadingFiles” explains how to read data like these from Dryad (https://datadryad.org/stash).

### Examples

    data(jaguar)
    str(jaguar)
    s <- summary(jaguar)
    ## Not run:
    ## works if the device is large enough:
    plot(s, layout = 30, las = 2)

    ## End(Not run)

[Package pegas version 1.1 Index]