R: Longitudinal Profiler of Microbiome Data

patPRO-package {patPRO} | R Documentation

## Longitudinal Profiler of Microbiome Data

### Description

patPRO (short for Patient Profiler) is a package for formatting Qiime microbiome analysis output files for downstream analyses and generating powerful graphics for visualizing longitudinal datasets per patient or averages of patient cohorts.

### Details

Package: | patPRO
Type: | Package
Version: | 1.0.0
Date: | 2015-09-18
License: | GPLv3

An overview of how to use the package, including the most important functions, is included in the supplemental R notebook patPROExampleWorkflow.html.

### Author(s)

Geoffrey Hannigan <ghanni@upenn.edu>, Loesche MA, Hodkinson BP, Mehta S, Elizabeth Grice <egrice@upenn.edu>

### References

patPRO: An R package for the visualization of longitudinal microbiome data. [Submitted] Hannigan GD, Loesche MA, Hodkinson BP, Mehta S, Grice EA. Bioinformatics.

[Package patPRO version 1.1.0 Index]