R: Computes the consensus matrix of the set of fits stored in...

consensus,NMFfitXn-method {NMF} | R Documentation

## Computes the consensus matrix of the set of fits stored in `object`, as the mean connectivity matrix across runs.

### Description

This method returns `NULL` on an empty object. The result is a matrix with several attributes attached, that are used by plotting functions such as `consensusmap` to annotate the plots.

### Usage

      ## S4 method for signature 'NMFfitXn'
    consensus(object, ...,
        no.attrib = FALSE)

### Arguments

`object` | an object with a suitable `predict` method.
`...` | extra arguments to allow extension. They are passed to `predict`, except for the `vector` and `factor` methods.
`no.attrib` | a logical that indicates if attributes containing information about the NMF model should be attached to the result (`TRUE`) or not (`FALSE`).

[Package NMF version 0.20.6 Index]