R: Extract model coefficients

coef.msm {msm} | R Documentation

## Extract model coefficients

### Description

Extract the estimated log transition intensities and the corresponding linear effects of each covariate.

### Usage

    ## S3 method for class 'msm'
    coef(object, ...)

### Arguments

`object` | A fitted multi-state model object, as returned by `msm`.
`...` | (unused) further arguments passed to or from other methods.

### Value

If there is no misclassification, `coef.msm` returns a list of matrices. The first component, labelled `logbaseline`, is a matrix containing the estimated transition intensities on the log scale with any covariates fixed at their means in the data. Each remaining component is a matrix giving the linear effects of the labelled covariate on the matrix of log intensities.

For misclassification models, `coef.msm` returns a list of lists. The first component, `Qmatrices`, is a list of matrices as described in the previous paragraph. The additional component `Ematrices` is a list of similar format containing the logit-misclassification probabilities and any estimated covariate effects.

### Author(s)

C. H. Jackson chris.jackson@mrc-bsu.cam.ac.uk

### See Also

`msm`

[Package msm version 1.6.9 Index]