R: Metabolomic Quantitative Trait Locus Mapping

# Metabolomic Quantitative Trait Locus Mapping

## Documentation for package ‘mQTL’ version 1.0

- DESCRIPTION file.

## Help Pages

mQTL-package | Metabolomic Quantitative Trait Locus mapping
alignSp | Base function for Spectrum Alignment
align_mQTL | Peak alignement and normalisation of metabolomic data
attachSegments | Concatenation of test and reference segments
format_mQTL | Routine to reformat the data into the required format
matchSegments | Matching of the segment of interest to the corresponding reference
mQTL | Metabolomic Quantitative Trait Locus mapping
normalise | Normalisation of metabolomic data
peakPeaks | Peak picking algorithm
post_mQTL | Plot top LOD results
ppersp | Plot a 3-D profile of LODs
pplot | Plot a color scale layer
pre_mQTL | Statistical Recoupling of variables for mQTL analysis
process_mQTL | mQTL mapping
segmentateSp | Segmentation of a spectrum of interest
selectRefSp | Automated selection of a reference spectrum
sgolay | Find the matrix of differentiation filters
sgolayDeriv | Calculate smoothed derivates
SRV | Statistical Recoupling of Variables
SRV_Corr | Statistical recoupling of variables in a supervised context
summary_mQTL | Function to summarize the results of a all the runs and their differences