R: Metabolomic Quantitative Trait Locus mapping

mQTL-package {mQTL} | R Documentation

## Metabolomic Quantitative Trait Locus mapping

### Description

mQTL provides a complete QTL analysis pipeline for 1H NMR data. Distinctive features include normalisation using QPN approach, peak alignment using RSPA approach, dimensionality reduction using SRV approach and finally QTL mapping using R/qtl package.

### Details

Package: | mQTL
Type: | Package
Version: | 1.0
Date: | 2013-09-18
License: | GPL (>= 3)

Main fucntions:

- `format_mQTL`: creates the proper format of data

- `align_mQTL`: peak alignment and normalisation

- `pre_mQTL`: dimension reduction by statistical recoupling of variables

- `process_mQTL`: computes LODs using extended Haley-Knott method

- `post_mQTL`: plots the results of a given run

- `summary_mQTL`: provides the results as a table

### Author(s)

Lyamine Hedjazi and Jean-Baptiste Cazier

Maintainer: Lyamine Hedjazi <l.hedjazi@fondation-ican.com>

[Package mQTL version 1.0 Index]