R: Plot top LOD results

post_mQTL {mQTL} | R Documentation

## Plot top LOD results

### Description

Function to plot the results of a given run

### Usage

    post_mQTL(results, probs = c(0.95, 0.99, 0.999, 0.9999))

### Arguments

`results` | results of mQTL analysis.
`probs` | numeric vector of probabilities with values in [0,1]. (Values up to 2e-14 outside that range are accepted and moved to the nearby endpoint.).

### Details

This function plots differents results corresponding to top LOD marker

### Value

It returns graphs and summaries

### Author(s)

Jean-Baptiste Cazier

### See Also

`pre_mQTL`

### Examples

      ## Not run:
    ## Pre-process data

        infile<-"ReducedData.dat" ## Reduced data by SRV
        cleangen<-"CleanGenoFile.dat" ## Genotype data file in csvs format
        nperm <- 0 ## Number of permutations
        MQTL_results<-process_mQTL(infile, cleangen, nperm))

        post_mQTL(results)## Plot mQTL results

    ## End(Not run)

[Package mQTL version 1.0 Index]