R: Write genotype calls to file

writeGenotypeCallsToFile {mlgt} | R Documentation

## Write genotype calls to file

### Description

A genotype call table or a list of tables can be written to tab-delimited file(s).

### Arguments

`callList` | A `list` of genotypes calls.
`genotypeCall` | Alternatively, supply a single table of genotype calls
`filePrefix` | A prefix to add to the start of each file name. Useful to distinguish sets of genotype call results from same run.
`file` | The file to write to. If none specified, function will attempt to make one. Ignored if singleFile = TRUE.
`singleFile` | FALSE/TRUE whether to concatenate results from a list of genotypeCalls
`writeParams` | List call parameter values at top of file? Beware using this option when singleFile = TRUE
`appendValue` | Used internally to concatenate results.

### Details

This function is quite flexible and can output a single table of concatenated results or a series of individual files. Call parameters can be included above each table but be careful doing this when `singleFile=TRUE`

### Value

Writes tables in the current working directory.

### Examples

    ## Not run:
    data("mlgtResult", package="mlgt")
    my.genoytpes <- callGenotypes(my.mlgt.Result)
    writeGenotypeCallsToFile(my.genotypes)

    ## End(Not run)

[Package mlgt version 0.16 Index]