microseq-package	microseq-package
Fasta	readFasta
findGenes	findGenes
findOrfs	findOrfs
findrRNA	findrRNA
gff2fasta	gff2fasta
gffSignature	gffSignature
gregexpr	gregexpr
iupac2regex	iupac2regex
lorfs	lorfs
microseq	microseq-package
msalign	msalign
msaTrim	msaTrim
muscle	muscle
orfLength	orfLength
plot.Fasta	plot.Fasta
plot.Fastq	plot.Fastq
readFasta	readFasta
readFastq	readFastq
readGFF	readGFF
regex2iupac	iupac2regex
reverseComplement	reverseComplement
summary.Fasta	plot.Fasta
summary.Fastq	plot.Fastq
translate	translate
writeFasta	readFasta
writeFastq	readFastq
writeGFF	readGFF
