R: Artificial data for Matrix eQTL sample code: Gene location...

geneloc {MatrixEQTL} | R Documentation

## Artificial data for Matrix eQTL sample code: Gene location file.

### Description

Artificial Gene location file for 10 genes.

geneid | chr | left | right
Gene_01 | chr1 | 721289 | 731289
Gene_02 | chr1 | 752565 | 762565
... | ... | ... | ...

### Format

A data frame with 4 columns.

`geneid`

  A column with gene names. The order does not have to match the gene expression data set.

`chr`

  Chromosome number, i.e. chr1.

`left`

  Lower (smaller) coordinate of the gene begining/end.

`right`

  Upper (larger) coordinate of the gene begining/end.

### Author(s)

Andrey A Shabalin andrey.shabalin@gmail.com

### References

The package website: http://www.bios.unc.edu/research/genomic_software/Matrix_eQTL/

### See Also

See `Matrix_eQTL_engine` for reference and sample code.

[Package MatrixEQTL version 2.2 Index]