R: Visualise sharing of clonotypes among samples

vis.immunr_public_statistics {immunarch}

R Documentation

Visualise sharing of clonotypes among samples

Visualise public clonotype frequencies.

## S3 method for class 'immunr_public_statistics'
vis(.data, ...)

`.data`	Public repertoire - an output from the pubRep function.
`...`	Other arguments passsed directly to upset.

A ggplot2 object.

data(immdata)
immdata$data <- lapply(immdata$data, head, 2000)
pr <- pubRep(immdata$data, .verbose = FALSE)
pubRepStatistics(pr) %>% vis()

[Package immunarch version 0.6.5 Index]