R: Visualise sharing of clonotypes among samples

vis.immunr_public_statistics {immunarch} | R Documentation

## Visualise sharing of clonotypes among samples

### Description

Visualise public clonotype frequencies.

### Usage

    ## S3 method for class 'immunr_public_statistics'
    vis(.data, ...)

### Arguments

`.data` | Public repertoire - an output from the pubRep function.
`...` | Other arguments passsed directly to upset.

### Value

A ggplot2 object.

### Examples

    data(immdata)
    immdata$data <- lapply(immdata$data, head, 2000)
    pr <- pubRep(immdata$data, .verbose = FALSE)
    pubRepStatistics(pr) %>% vis()

[Package immunarch version 0.6.5 Index]