R: A function to generate cluster separability matrix plot.

plotiCluster {iCluster} | R Documentation

## A function to generate cluster separability matrix plot.

### Description

A function to generate cluster separability matrix plot.

### Usage

    plotiCluster(fit,label=NULL)

### Arguments

`fit` | A iCluster object
`label` | Sample labels

### Value

no value returned.

### Author(s)

Ronglai Shen shenr@mskcc.org

### References

Ronglai Shen, Adam Olshen, Marc Ladanyi. (2009). Integrative clustering of multiple genomic data types using a joint latent variable model with application to breast and lung cancer subtype analysis. Bioinformatics 25, 2906-2912.

### See Also

`iCluster`, `compute.pod`

### Examples

    # library(iCluster)
    # data(breast.chr17)
    # fit=iCluster(datasets=breast.chr17, k=4, lambda=c(0.2,0.2))
    # plotiCluster(fit=fit, label=rownames(breast.chr17[[2]]))
    # compute.pod(fit)

[Package iCluster version 2.1.0 Index]