R: Internally Used Functions

HiddenMarkov-internal {HiddenMarkov} | R Documentation

## Internally Used Functions

### Description

This page lists internally used functions. They should not be required by most users.

### Usage

    as.dthmm(object)
    as.mmglm0(object)

    makedensity(distn)
    makedensity1(distn)
    makedistn(distn)

    getj(x, j)

    dglm(x, x1, beta0, beta1, sigma, family, link, size = NA,
         log = FALSE)
    pglm(q, x1, beta0, beta1, sigma, family, link, size = NA,
         log.p = FALSE)
    dmmglm(x, beta, sigma, glmfamily, Xdesign, size=NA, log=FALSE)
    pmmglm(x, beta, sigma, glmfamily, Xdesign, size=NA, log.p=FALSE)

    mmglm(...)

### Details

The function `makedensity` is used to reparameterise various R probability (or density) functions (e.g. `dnorm` and `dpois`) into a format with a standard argument list. Similarly, `makedistn` reparameterises a distribution function.

The function `getj` is used to extract the jth element from each vector component in a list object.

The function `as.dthmm` coerces an object with class `"mmglm0"` to an object with class `"dthmm"`. Similarly, the function `as.mmglm0` coerces an object with class `"dthmm"` to an object with class `"mmglm0"` (if possible).

The functions `dglm` and `pglm` calculate the density and probability, respectively, for an observation given a generalised linear model.

The functions `dmmglm` and `pmmglm` calculate the density and probability, respectively, for an observation given a generalised linear model.

[Package HiddenMarkov version 1.8-8 Index]