R: Simulated data for seqhap examples

seqhap.dat {haplo.stats} | R Documentation

## Simulated data for seqhap examples

### Description

Simulated data set for the demonstration of seqhap functionality. Contains one column for disease status and columns representing 10 SNP loci with a known association. seqhap.pos contains a column for chromosome position, as required by seqhap.

### Usage

    data(seqhap.dat)
    data(seqhap.pos)

### Format

A data frame with 1000 observations on the following 21 variables.

`disease`

  numeric, indicator of disease status 0=no, 1=yes

`m1.1`

  first allele of genotype

`m1.2`

  second allele of genotype

`m2.1`

  first allele of genotype

`m2.2`

  second allele of genotype

`m3.1`

  first allele of genotype

`m3.2`

  second allele of genotype

`m4.1`

  first allele of genotype

`m4.2`

  second allele of genotype

`m5.1`

  first allele of genotype

`m5.2`

  second allele of genotype

`m6.1`

  first allele of genotype

`m6.2`

  second allele of genotype

`m7.1`

  first allele of genotype

`m7.2`

  second allele of genotype

`m8.1`

  first allele of genotype

`m8.2`

  second allele of genotype

`m9.1`

  first allele of genotype

`m9.2`

  second allele of genotype

`m10.1`

  first allele of genotype

`m10.2`

  second allele of genotype

### References

Yu Z, Schaid DJ (2007) Sequantial haplotype scan methods for association analysis. Gen Epi, in print.

### Examples

    data(seqhap.dat)

[Package haplo.stats version 1.7.9 Index]