R: Embryonic Stem Cell from Mouse

esc {gss} | R Documentation

## Embryonic Stem Cell from Mouse

### Description

Data concerning mouse embryonic stem cell gene expression and transcription factor association strength.

### Usage

    data(esc)

### Format

A data frame containing 1027 genes with the following variables.

`y1` | Gene expression after 4 days.
`y2` | Gene expression after 8 days.
`y3` | Gene expression after 14 days.
`klf4` | Score of TFAS with KLF4.
`nanog` | Score of TFAS with NANOG.
`oct4` | Score of TFAS with OCT4.
`sox2` | Score of TFAS with SOX2.
`clusterID` | Cluster identification.

### References

Cai, J., Xie, D., Fan, Z., Chipperfield, H., Marden, J., Wong, W. H., and Zhong, S. (2010), Modeling co-expression across species for complex traits: insights to the difference of human and mouse embryonic stem cells. PLoS Computational Biology, 6, e1000707.

Ouyang, Z., Zhou, Q., and Wong, W. H. (2009), chip-seq of transcription factors predicts absolute and differential gene expression in embryonic stem cells. Proceedings of the National Academy of Sciences of USA, 106, 21521–21526.

[Package gss version 2.1-7 Index]