GMD-package             The Package for Generalized Minimum Distance
                        (GMD) Computation
bedgraph.to.depth       Convert a BedGraph fiel to a vector of
                        depth-like signals
cage                    CAGE Data: Transcription Start Site
                        Distributions (TSSDs) by CAGE tags
chipseq                 ChIP-seq data: ChIP-seq Enrichment around TSSs
css                     Clustering Sum-of-Squares for clustering
                        evaluation
elbow                   The "Elbow" Method for Clustering Evaluation
equalize.list           Make members of a list equal size
gdist                   Generalized Distance Matrix Computation
get.sep                 Get row or column lines of separation for
                        heatmap.3
ghist                   Generalized Histogram Computation
gmdm                    Generalized Minimum Distance Matrix
gmdp                    Generalized Minimum Distance between a pair of
                        distributions
heatmap.3               Enhanced Heatmap Representation with Dendrogram
                        and Partition
legend                  Add Legends to Plots
mhist.summary           Bin-wise summary of histograms
plot.gmdm               S3 method for class 'gmdm'
plot.gmdp               Plot function for class gmdp
plot.mhist              S3 method for class 'mhist'.
ts2df                   Convert time series to data frame
