| plot.raw_spct {ggspectra} | R Documentation |
This function returns a ggplot object with an annotated plot of a response_spct object.
## S3 method for class 'raw_spct'
plot(x, ..., w.band = getOption("photobiology.plot.bands",
default = list(UVC(), UVB(), UVA(), PAR())), range = NULL,
unit.out = "counts", pc.out = FALSE, label.qty = "mean", span = NULL,
annotations = NULL, time.format = "", tz = "UTC", norm = NULL,
text.size = 2.5, na.rm = TRUE)
x |
a raw_spct object |
... |
other arguments passed along, such as |
w.band |
a single waveband object or a list of waveband objects |
range |
an R object on which range() returns a vector of length 2, with min annd max wavelengths (nm) |
unit.out |
character IGNORED |
pc.out |
logical, if TRUE use percents instead of fraction of one |
label.qty |
character string giving the type of summary quantity to use for labels, one of "mean", "total", "contribution", and "relative". |
span |
a peak is defined as an element in a sequence which is greater than all other elements within a window of width span centered at that element. |
annotations |
a character vector ("summaries" is ignored) |
time.format |
character Format as accepted by |
tz |
character Time zone to use for title and/or subtitle. |
norm |
numeric normalization wavelength (nm) or character string "max" for normalization at the wavelength of highest peak. |
text.size |
numeric size of text in the plot decorations. |
na.rm |
logical. |
a ggplot object.
Note that scales are expanded so as to make space for the annotations. The object returned is a ggplot objects, and can be further manipulated.
Other plot functions: plot.calibration_spct,
plot.cps_spct,
plot.filter_spct,
plot.object_spct,
plot.reflector_spct,
plot.response_spct,
plot.source_spct,
plot.waveband