R: Integrative Genomics Viewer (IGV) Color Palettes

pal_igv {ggsci} | R Documentation

## Integrative Genomics Viewer (IGV) Color Palettes

### Description

Color palettes based on the colors used by Integrative Genomics Viewer (IGV).

### Usage

    pal_igv(palette = c("default", "alternating"), alpha = 1)

### Arguments

`palette` | Palette type. There are two available options: `"default"` (51-color palette); `"alternating"` (2-color palette).
`alpha` | Transparency level, a real number in (0, 1]. See `alpha` in `rgb` for details.

### Author(s)

Nan Xiao <me@nanx.me> | <https://nanx.me>

### References

James T. Robinson, Helga Thorvaldsd\'ottir, Wendy Winckler, Mitchell Guttman, Eric S. Lander, Gad Getz, Jill P. Mesirov. Integrative Genomics Viewer. Nature Biotechnology 29, 24–26 (2011).

### Examples

    library("scales")
    show_col(pal_igv("default")(51))
    show_col(pal_igv("alternating")(2))

[Package ggsci version 2.9 Index]